RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 TMEM86BQ8N661 226 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 ZNF485Q8NCK3 441 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 OR4M1Q8NGD0 313 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 OR5D13Q8NGL4 314 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 OR52N1Q8NH53 320 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 TBC1D15Q8TC07 691 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 GPR148Q8TDV2 347 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 CNOT2Q9NZN8 540 aaKnown RBP16.63■□□□□ 0.25
GTF3A-202ENST00000419181 A0A1W2PPH5 198 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 TMEM82A0PJX8 343 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 NPFFO15130 113 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 OGG1O15527 345 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 XPNPEP2O43895 674 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 KDM4BO94953 1096 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 EEF1B2P24534 225 aaKnown RBP16.62■□□□□ 0.25
GTF3A-202ENST00000419181 UBE2E1P51965 193 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 ZNF273Q14593 569 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 SPIN3Q5JUX0 258 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 ASPHD2Q6ICH7 369 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 HCP5Q6MZN7 132 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 C16orf87Q6PH81 154 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 C17orf107Q6ZR85 190 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 SAXO1Q8IYX7 474 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 OR8H2Q8N162 312 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 C11orf42Q8N5U0 333 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 OR5D18Q8NGL1 313 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 SSMEM1Q8WWF3 244 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 NRG4Q8WWG1 115 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 SMIM19Q96E16 107 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 SNX22Q96L94 193 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 HMG20AQ9NP66 347 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 PLCXD1Q9NUJ7 323 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 CHCHD3Q9NX63 227 aaKnown RBP16.62■□□□□ 0.25
GTF3A-202ENST00000419181 PSORS1C1Q9UIG5 152 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 POMT1Q9Y6A1 747 aa16.62■□□□□ 0.25
GTF3A-202ENST00000419181 HCKP08631 526 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 PRKACAP17612 351 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 SOX2P48431 317 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 ZP1P60852 638 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 KISS1Q15726 138 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 AWAT1Q58HT5 328 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 CHIAQ9BZP6 476 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 RHOFQ9HBH0 211 aa16.61■□□□□ 0.25
GTF3A-202ENST00000419181 A0A1W2PRD5 423 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 A0A1W2PRF3 423 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 A0A1W2PRM7 423 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 CD2P06729 351 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 CALCBP10092 127 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 CCL3L1P16619 93 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 RAB3AP20336 220 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 CFPP27918 469 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 DUSP1P28562 367 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 SAA4P35542 130 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 ACSM1Q08AH1 577 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 FOXL1Q12952 345 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 DMKNQ6E0U4 476 aaPredicted RBP16.6■□□□□ 0.25
GTF3A-202ENST00000419181 AHSA2Q719I0 299 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 GDPD3Q7L5L3 318 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 PNKDQ8N490 385 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 C3orf56Q8N813 242 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 ZSCAN4Q8NAM6 433 aaPredicted RBP16.6■□□□□ 0.25
GTF3A-202ENST00000419181 OR52N4Q8NGI2 321 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 OR51A2Q8NGJ7 313 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 TMEM106AQ96A25 262 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 ZNF281Q9Y2X9 895 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 FAM96BQ9Y3D0 163 aa16.6■□□□□ 0.25
GTF3A-202ENST00000419181 ERICH4A6NGS2 130 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 H0YJX3 145 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 PSPNO60542 156 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 FBP1P09467 338 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 IER3P46695 156 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 SNU13P55769 128 aaKnown RBP16.59■□□□□ 0.25
GTF3A-202ENST00000419181 DLX6P56179 175 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 EDDM3BP56851 147 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 BPIFB6Q8NFQ5 453 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 TNFRSF19Q9NS68 423 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 FKBP14Q9NWM8 211 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 TAS2R4Q9NYW5 299 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 ZNRD1Q9P1U0 126 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 GSTK1Q9Y2Q3 226 aa16.59■□□□□ 0.25
GTF3A-202ENST00000419181 SF3B6Q9Y3B4 125 aaKnown RBP16.59■□□□□ 0.25
GTF3A-202ENST00000419181 hCG_1809904A0A1W2PP81 198 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 A0A1W2PPE2 198 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 A0A1W2PR64 198 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 A0A1W2PRV1 198 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 MEIOCA2RUB1 952 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 C17orf98A8MV24 154 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 IGHV4-59P01825 116 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 TMEM225BP0DP42 221 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 GABRR1P24046 479 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 C21orf33P30042 268 aaPredicted RBP16.58■□□□□ 0.24
GTF3A-202ENST00000419181 AQP4P55087 323 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 TCF23Q7RTU1 214 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 OR13C5Q8NGS8 318 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 TAF15Q92804 592 aaKnown RBP eCLIP16.58■□□□□ 0.24
GTF3A-202ENST00000419181 GHSRQ92847 366 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 CPNE2Q96FN4 548 aaPredicted RBP16.58■□□□□ 0.24
GTF3A-202ENST00000419181 PGLYRP3Q96LB9 341 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 CHST6Q9GZX3 395 aa16.58■□□□□ 0.24
GTF3A-202ENST00000419181 GLS2Q9UI32 602 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms