RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ZNF737O75373 536 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 IGKV1D-12P01611 117 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 RNASE1P07998 156 aaKnown RBP15.44■□□□□ 0.06
TRIM56-202ENST00000412507 DUSP1P28562 367 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 AQP4P55087 323 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 BLMHQ13867 455 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 TMEM200BQ69YZ2 307 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 AHSA2Q719I0 299 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 OR52N1Q8NH53 320 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 GPR148Q8TDV2 347 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 METTL8Q9H825 291 aaKnown RBP15.44■□□□□ 0.06
TRIM56-202ENST00000412507 TNFRSF19Q9NS68 423 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 PLCXD1Q9NUJ7 323 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 CNOT2Q9NZN8 540 aaKnown RBP15.44■□□□□ 0.06
TRIM56-202ENST00000412507 PSORS1C1Q9UIG5 152 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 TMEM82A0PJX8 343 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 ALX3O95076 343 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 ATP6V1G2O95670 118 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 HAND1O96004 215 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 MELTFP08582 738 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 GUCA2AQ02747 115 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 ZNF273Q14593 569 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 ASPHD2Q6ICH7 369 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 FIP1L1Q6UN15 594 aaKnown RBP15.43■□□□□ 0.06
TRIM56-202ENST00000412507 PNKDQ8N490 385 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 STX19Q8N4C7 294 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 ZFP41Q8N8Y5 198 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 ZNF485Q8NCK3 441 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 SMIM19Q96E16 107 aa15.43■□□□□ 0.06
TRIM56-202ENST00000412507 UNKLQ9H9P5 680 aaKnown RBP15.43■□□□□ 0.06
TRIM56-202ENST00000412507 KDM4BO94953 1096 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 CD2P06729 351 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 CCL3L1P16619 93 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 RAB3AP20336 220 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 EEF1B2P24534 225 aaKnown RBP15.42■□□□□ 0.06
TRIM56-202ENST00000412507 C21orf33P30042 268 aaPredicted RBP15.42■□□□□ 0.06
TRIM56-202ENST00000412507 COMPP49747 757 aaPredicted RBP15.42■□□□□ 0.06
TRIM56-202ENST00000412507 ZP1P60852 638 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 ZNF146Q15072 292 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 KISS1Q15726 138 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 C17orf107Q6ZR85 190 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 GDPD3Q7L5L3 318 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 OR8H2Q8N162 312 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 OR51A2Q8NGJ7 313 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 OR13C5Q8NGS8 318 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 SNX22Q96L94 193 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 SEBOXQ9HB31 216 aaPredicted RBP15.42■□□□□ 0.06
TRIM56-202ENST00000412507 HMG20AQ9NP66 347 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 TAS2R4Q9NYW5 299 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 GSTK1Q9Y2Q3 226 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 ZNF281Q9Y2X9 895 aa15.42■□□□□ 0.06
TRIM56-202ENST00000412507 A0A1W2PPH5 198 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 MEX3AA1L020 520 aaKnown RBP15.41■□□□□ 0.06
TRIM56-202ENST00000412507 NPFFO15130 113 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 TMEM225BP0DP42 221 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 HKR1P10072 659 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 UBE2E1P51965 193 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 EDDM3BP56851 147 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 ERVFRD-1P60508 538 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 SPIN3Q5JUX0 258 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 NCR3LG1Q68D85 454 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 DMKNQ6E0U4 476 aaPredicted RBP15.41■□□□□ 0.06
TRIM56-202ENST00000412507 HCP5Q6MZN7 132 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 ZNF529Q6P280 563 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 C16orf87Q6PH81 154 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 SAXO1Q8IYX7 474 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 C11orf42Q8N5U0 333 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 OR52N4Q8NGI2 321 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 OR5D13Q8NGL4 314 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 TBC1D15Q8TC07 691 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 TAF15Q92804 592 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRIM56-202ENST00000412507 TMEM106AQ96A25 262 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 ORAI1Q96D31 301 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 CHST6Q9GZX3 395 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 FKBP14Q9NWM8 211 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 FAM96BQ9Y3D0 163 aa15.41■□□□□ 0.06
TRIM56-202ENST00000412507 H0YJX3 145 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 SIRPB1O00241 398 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 GABRR1P24046 479 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 EDDM3AQ14507 147 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 SATL1Q86VE3 508 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 ZSCAN4Q8NAM6 433 aaPredicted RBP15.4■□□□□ 0.06
TRIM56-202ENST00000412507 GHSRQ92847 366 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 GPER1Q99527 375 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 GLS2Q9UI32 602 aa15.4■□□□□ 0.06
TRIM56-202ENST00000412507 PNMA8CA0A1B0GUJ8 204 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 MEIOCA2RUB1 952 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 MYL12BO14950 172 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 MAGEB3O15480 346 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 PSPNO60542 156 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 SAA4P35542 130 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 DOC2BQ14184 412 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 GRK1Q15835 563 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 AWAT1Q58HT5 328 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 C6orf141Q5SZD1 244 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 LDLRAD3Q86YD5 345 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 TPRX1Q8N7U7 411 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 OR4S1Q8NGB4 309 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 SSMEM1Q8WWF3 244 aa15.39■□□□□ 0.05
TRIM56-202ENST00000412507 PGLYRP3Q96LB9 341 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms