RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 FAM90A22PA8MWA6 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A12PA8MX19 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A5PA8MXJ8 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A23PA8MXZ1 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 SH2D1BO14796 132 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 OR7C1O76099 320 aaPredicted RBP11.99□□□□□ -0.49
SKA1-202ENST00000398452 TPPPO94811 219 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A15PP0C7V4 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A13PP0C7W8 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A14PP0C7W9 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A24PP0C7X0 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 ZNF44P15621 663 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 CDK2P24941 298 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 BLVRBP30043 206 aaPredicted RBP11.99□□□□□ -0.49
SKA1-202ENST00000398452 CFHR2P36980 270 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 ETV6P41212 452 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 RBM11P57052 281 aaKnown RBP11.99□□□□□ -0.49
SKA1-202ENST00000398452 QRFPP83859 136 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 SCN1BQ07699 218 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 IKZF1Q13422 519 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 MADCAM1Q13477 382 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 TAF9Q16594 264 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 ZNF181Q2M3W8 571 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 MPV17LQ2QL34 196 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 NKAPLQ5M9Q1 402 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 ATAD3CQ5T2N8 411 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 C11orf71Q6IPW1 123 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 Q6ZTK2 550 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 FAM90A1Q86YD7 464 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 C11orf53Q8IXP5 236 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 NEK7Q8TDX7 302 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 RAB3CQ96E17 227 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 Q96M66 194 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 NUDT16L1Q9BRJ7 211 aaKnown RBP11.99□□□□□ -0.49
SKA1-202ENST00000398452 LPAR5Q9H1C0 372 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 OR14J1Q9UGF5 321 aa11.99□□□□□ -0.49
SKA1-202ENST00000398452 CSMD1Q96PZ7 3565 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 F8P00451 2351 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 A0A1W2PPR1 153 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 SRRM5B3KS81 715 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 H7C417 338 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 DEGS1O15121 323 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 TAS2R20P59543 309 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 MRPS10P82664 201 aaKnown RBP11.98□□□□□ -0.49
SKA1-202ENST00000398452 RBM39Q14498 530 aaKnown RBP11.98□□□□□ -0.49
SKA1-202ENST00000398452 KCNJ8Q15842 424 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 MICBQ29980 383 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 PIGYQ3MUY2 71 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 NHLRC3Q5JS37 347 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 ACP7Q6ZNF0 438 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 SNX29P2Q8IUI4 249 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 IZUMO1Q8IYV9 350 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 DTX3Q8N9I9 347 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 Q8NFD4 153 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 PPP1R35Q8TAP8 253 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 RDH5Q92781 318 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 TIMD4Q96H15 378 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 AKIP1Q9NQ31 210 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 TREM2Q9NZC2 230 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 PLCE1Q9P212 2302 aa11.98□□□□□ -0.49
SKA1-202ENST00000398452 FBN2P35556 2912 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 SPG11Q96JI7 2443 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 TRAV38-1A0A0B4J264 116 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 GEMIN2O14893 280 aaKnown RBP11.97□□□□□ -0.49
SKA1-202ENST00000398452 CYB5R3P00387 301 aaPredicted RBP11.97□□□□□ -0.49
SKA1-202ENST00000398452 KNG1P01042 644 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 CD8AP01732 235 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 HPXP02790 462 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 CD40LGP29965 261 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 CDKN1AP38936 164 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 PPP5CP53041 499 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 GNG2P59768 71 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 ERVK11-1P61568 191 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 PLA2G7Q13093 441 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 ARFRP1Q13795 201 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 TRIQKQ629K1 86 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 GDPD1Q8N9F7 314 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 NICN1Q9BSH3 213 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 PLEKHF2Q9H8W4 249 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 NLKQ9UBE8 527 aa11.97□□□□□ -0.49
SKA1-202ENST00000398452 PPIAL4EA0A075B759 164 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 NKX6-3A6NJ46 265 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 MCRIP1C9JLW8 97 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 PPIAL4DF5H284 164 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 SOCS1O15524 211 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 PDCD6O75340 191 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 HAND1O96004 215 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 GSTP1P09211 210 aaKnown RBP11.96□□□□□ -0.49
SKA1-202ENST00000398452 PPIAL4FP0DN26 164 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 DAOP14920 347 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 MUC1P15941 1255 aaPredicted RBP11.96□□□□□ -0.49
SKA1-202ENST00000398452 FUT3P21217 361 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 CD80P33681 288 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 PRSS3P35030 304 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 GABRA2P47869 451 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 CARTPTQ16568 116 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 CDNFQ49AH0 187 aa11.96□□□□□ -0.49
SKA1-202ENST00000398452 C16orf87Q6PH81 154 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms