RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CLDN15P56746 228 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 LYZL2Q7Z4W2 148 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 CDH20Q9HBT6 801 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 C3orf85A0A1B0GTC6 90 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 H3BMH7 237 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 GEMIN2O14893 280 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 CER1O95813 267 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 NQO2P16083 231 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 EPHA8P29322 1005 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 HAAOP46952 286 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 TMEM50BP56557 158 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 DMWDQ09019 674 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 DCAF12Q5T6F0 453 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 DHRS7BQ6IAN0 325 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 OR10J5Q8NHC4 309 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 TRAPPC2LQ9UL33 140 aa10.22□□□□□ -0.77
UBE2D3-209ENST00000394804 FAM24AA6NFZ4 105 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 ZFP92A6NM28 416 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 PATE4P0C8F1 98 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 PNLIPP16233 465 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 UBE2NP61088 152 aaKnown RBP10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 RAB11AP62491 216 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 FABP9Q0Z7S8 132 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 SOX7Q9BT81 388 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 OSGIN2Q9Y236 505 aa10.21□□□□□ -0.77
UBE2D3-209ENST00000394804 MED19A0JLT2 244 aaPredicted RBP10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 PPP1R2P9O14990 202 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 RAC3P60763 192 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 EIF3IQ13347 325 aaKnown RBP10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 IL11RAQ14626 422 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 SHEQ5VZ18 495 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 ZNF611Q8N823 705 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 OR8U1Q8NH10 309 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 ISOC2Q96AB3 205 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 LRP5LA4QPB2 252 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 ONECUT2O95948 504 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 IDH3GP51553 393 aaPredicted RBP10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 ZDHHC23Q8IYP9 409 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 ZNF441Q8N8Z8 693 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 RDH5Q92781 318 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 RNF126Q9BV68 326 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 OR14J1Q9UGF5 321 aa10.21□□□□□ -0.78
UBE2D3-209ENST00000394804 A0A1W2PPH5 198 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 F8VVB4 439 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 F8VWA3 439 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 CA11O75493 328 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 CCL3P10147 92 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 MSMO1Q15800 293 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 SF3B5Q9BWJ5 86 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 GNG13Q9P2W3 67 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 STARD10Q9Y365 291 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 RNF212BA8MTL3 300 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 FGF16O43320 207 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 FCGR3AP08637 254 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 ZNF708P17019 499 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 SRSF4Q08170 494 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 UBE2V2Q15819 145 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 SLC25A45Q8N413 288 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 RIMS4Q9H426 269 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 AHCTF1Q8WYP5 2266 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 C5orf49A4QMS7 147 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 CRYM-AS1A6NIL9 109 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 HS3ST1O14792 307 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 CST2P09228 141 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 DAOP14920 347 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 USF2Q15853 346 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 ZNF239Q16600 458 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 THNSL2Q86YJ6 484 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 UBAC2Q8NBM4 344 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 OR5C1Q8NGR4 320 aa10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 MRPL13Q9BYD1 178 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-209ENST00000394804 A0A096LPE4 126 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 A0A1W2PPZ6 126 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 H0YIZ8 118 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 ADAM20O43506 726 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 SRD5A2P31213 254 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 POLR2GP62487 172 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 PIGYQ3MUY2 71 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 WIPI1Q5MNZ9 446 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 HIST2H3PS2Q5TEC6 136 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 FAM27BQ5VT28 67 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 RBMS3Q6XE24 437 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 BIVMQ86UB2 503 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 TMEM123Q8N131 208 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 APH1AQ96BI3 265 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 RTBDNQ9BSG5 229 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 SLC39A9Q9NUM3 307 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 DHRS7CA6NNS2 312 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 PPYP01298 95 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 ARG1P05089 322 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 SMIM6P0DI80 62 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 LIFP15018 202 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 OR56B2PQ8NGI1 322 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 OR10S1Q8NGN2 331 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 MAP1BP46821 2468 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 IGHV5-10-1A0A0J9YXX1 117 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 H3BP45 60 aa10.19□□□□□ -0.78
UBE2D3-209ENST00000394804 H7C1Q1 480 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms