RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DPRXA6NFQ7 191 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 OR5B21A6NL26 309 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 F5H5P2 479 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 MFNGO00587 321 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 DHFRP00374 187 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 GRPP07492 148 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 MELTFP08582 738 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 H2AFB2P0C5Z0 115 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 KITLGP21583 273 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 UQCRFS1P47985 274 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 AP3S2P59780 193 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 DAZAP2Q15038 168 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 CLLU1Q5K131 121 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 OR52W1Q6IF63 320 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 ZNF573Q86YE8 665 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 ZSCAN4Q8NAM6 433 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 OR4C16Q8NGL9 310 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 PRR7Q8TB68 274 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 MICU1Q9BPX6 476 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 NUDT16L1Q9BRJ7 211 aaKnown RBP10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 OR10A4Q9H209 315 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 SCPEP1Q9HB40 452 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 IL36GQ9NZH8 169 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 HSPB11Q9Y547 144 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 COL12A1Q99715 3063 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 CACNA1DQ01668 2161 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 M0QYG6 137 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 SULT1C2O00338 296 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 ABCD4O14678 606 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 NDUFA2O43678 99 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 CHRNB4P30926 498 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 ASCL1P50553 236 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 GMFBP60983 142 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 HOXA4Q00056 320 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 BSPH1Q075Z2 132 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 GRK1Q15835 563 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 TEX261Q6UWH6 196 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 SCCPDHQ8NBX0 429 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 TMEM171Q8WVE6 324 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 DYRK2Q92630 601 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 MED28Q9H204 178 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 PLEKHJ1Q9NW61 149 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 U3KQ87 197 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 ABCA4P78363 2273 aa10.38□□□□□ -0.75
SPTBN1-203ENST00000389980 TRAPPC2LH3BP13 241 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 CDIPTO14735 213 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 IFNA7P01567 189 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 GSTP1P09211 210 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 CSF1P09603 554 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 DUSP1P28562 367 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 GLRXP35754 106 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 RBM11P57052 281 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 ACTBP60709 375 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 ACTG1P63261 375 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 ZNF154Q13106 437 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 ARFRP1Q13795 201 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 FAM189A2Q15884 450 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 TMEM108Q6UXF1 575 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 MKXQ8IYA7 352 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 C9orf62Q8N4C0 152 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 OR8H1Q8NGG4 311 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 OR56B4Q8NH76 319 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 HDHD3Q9BSH5 251 aaPredicted RBP10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 FAAP24Q9BTP7 215 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 C20orf85Q9H1P6 137 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 GHITMQ9H3K2 345 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 COQ3Q9NZJ6 369 aa10.37□□□□□ -0.75
SPTBN1-203ENST00000389980 CYB5AP00167 134 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ZNF250P15622 560 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 TUBG1P23258 451 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 B2MP61769 119 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ST3GAL2Q16842 350 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 FAM76BQ5HYJ3 339 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 SLC22A25Q6T423 547 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 BTN2A1Q7KYR7 527 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 LINC01560Q8TB33 94 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ST8SIA4Q92187 359 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 C7orf50Q9BRJ6 194 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 TINAGL1Q9GZM7 467 aaPredicted RBP10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 OR51J1Q9H342 316 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 TUBG2Q9NRH3 451 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ZNF230Q9UIE0 474 aaPredicted RBP10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ZNF222Q9UK12 451 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 LRP5LA4QPB2 252 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 OR7C1O76099 320 aaPredicted RBP10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 CSN2P05814 226 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 PRKACAP17612 351 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 PRAMEF6Q5VXH4 476 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ADAM5Q6NVV9 412 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 STEAP1BQ6NZ63 245 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ZNF826PQ6ZT77 177 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 TMEM200AQ86VY9 491 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 SAXO1Q8IYX7 474 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 ZNF680Q8NEM1 530 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 OR11H7Q8NGC8 314 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 CA5BP1Q8WTZ4 195 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 CNTNAP3BQ96NU0 1288 aa10.36□□□□□ -0.75
SPTBN1-203ENST00000389980 USB1Q9BQ65 265 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms