RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 PEF1Q9UBV8 284 aaKnown RBP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 TNRC18O15417 2968 aaPredicted RBP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 MYO7AQ13402 2215 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 TRBV6-7A0A0A0MS04 114 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 DHRS12A0PJE2 317 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 OR52A4PA6NMU1 304 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 SLC22A1O15245 554 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 KERAO60938 352 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 SCGB2A1O75556 95 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 SMC2O95347 1197 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 SERPINE2P07093 398 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 RPSAP08865 295 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 CRABP1P29762 137 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 RNASE4P34096 147 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 OR2B6P58173 313 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 ZNF90Q03938 601 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 SKP2Q13309 424 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 DDX39BQ13838 428 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 HADHQ16836 314 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 IMMTQ16891 758 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 LRRC75BQ2VPJ9 315 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 MAJINQ3KP22 176 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 GLYATQ6IB77 296 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 RPS19BP1Q86WX3 136 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 PRRC1Q96M27 445 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 CCDC43Q96MW1 224 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 SLC39A3Q9BRY0 314 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 TXNL4BQ9NX01 149 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 SLC39A1Q9NY26 324 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 ADAM28Q9UKQ2 775 aa-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.65□□□□□ -2.67
MIR548A3-201ENST00000385297 LINC00854A0A1B0GVQ3 168 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 RBFOX3A6NFN3 312 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 RNF113AO15541 343 aaKnown RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 GPR75O95800 540 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 HPRT1P00492 218 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 ERCC1P07992 297 aaPredicted RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 GTF2F2P13984 249 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 PBLDP30039 288 aaPredicted RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 FOXN2P32314 431 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 PPICP45877 212 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 RPL14P50914 215 aaKnown RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 ACLYP53396 1101 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 YBEYP58557 167 aaPredicted RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 QRFPP83859 136 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 ADIGQ0VDE8 80 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 VPS26BQ4G0F5 336 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 SPATA31B1PQ5VZV4 182 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 C12orf54Q6X4T0 127 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 Q6ZSR3 168 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 EFL1Q7Z2Z2 1120 aaKnown RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 LRRC28Q86X40 367 aaPredicted RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 TBC1D21Q8IYX1 336 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 C2orf15Q8WU43 125 aaKnown RBP-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 HIST1H2BAQ96A08 127 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 APH1AQ96BI3 265 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 TAMM41Q96BW9 452 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 COQ2Q96H96 371 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 ZNF426Q9BUY5 554 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 TAPBPLQ9BX59 468 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 POTEKPQ9BYX7 375 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 PSMD13Q9UNM6 376 aa-1.66□□□□□ -2.68
MIR548A3-201ENST00000385297 TMSB15BA0A087X1C1 80 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 NCR3O14931 201 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 SOX14O95416 240 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 IFITM1P13164 125 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 HLA-GP17693 338 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 P2RY2P41231 377 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 RAB11AP62491 216 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 CBX1P83916 185 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 ERHP84090 104 aaKnown RBP-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 PPM1LQ5SGD2 360 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 TPTE2P1Q5T6R2 138 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 REEP3Q6NUK4 255 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 ANGPTL8Q6UXH0 198 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 BBS5Q8N3I7 341 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 CPB2Q96IY4 423 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 GABRG3Q99928 467 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 NT5MQ9NPB1 228 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 CHRNA9Q9UGM1 479 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 RPUSD1Q9UJJ7 312 aaKnown RBP-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 ZFP30Q9Y2G7 519 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 PRRC2CQ9Y520 2896 aaKnown RBP-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 RALGAPA2Q2PPJ7 1873 aa-1.67□□□□□ -2.68
MIR548A3-201ENST00000385297 LOC110117498A0A087WWA1 95 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 IGSF23A1L1A6 192 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 M0R378 163 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 SLC25A20O43772 301 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 ZNF682O95780 498 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 INCA1Q0VD86 236 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 WDR43Q15061 677 aaKnown RBP eCLIP-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 USH1GQ495M9 461 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 TMEM155Q4W5P6 130 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 ZCCHC23Q6ZST2 131 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 CCDC91Q7Z6B0 441 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 NIT1Q86X76 327 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 OR9K2Q8NGE7 335 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 OR52M1Q8NGK5 317 aa-1.68□□□□□ -2.68
MIR548A3-201ENST00000385297 NUBPLQ8TB37 319 aa-1.68□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms