RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 IGKV3-15P01624 115 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 GLI4P10075 376 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 FUT3P21217 361 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 KIR2DL2P43627 348 aaPredicted RBP8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 MRPS10P82664 201 aaKnown RBP8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 CALHM3Q86XJ0 350 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 OR4S2Q8NH73 311 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 APH1BQ8WW43 257 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 CIB3Q96Q77 187 aaPredicted RBP8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 DDOQ99489 341 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 M0QZK8 103 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 FBXO24O75426 580 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 CLDN12P56749 244 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 EGR3Q06889 387 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 SPANXN5Q5MJ07 72 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 RBM45Q8IUH3 476 aaKnown RBP8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 PRSS35Q8N3Z0 413 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 C9orf106Q8NAJ2 232 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 OR1S2Q8NGQ3 325 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 HSPE1-MOB4S4R3N1 261 aa8.04□□□□□ -1.12
LIMCH1-202ENST00000381753 C20orf202A1L168 122 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 NAP1L6A6NFF2 107 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 CRXO43186 299 aaPredicted RBP8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 SEMG1P04279 462 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 TAGLNQ01995 201 aaKnown RBP8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 LGI3Q8N145 548 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 OR2T10Q8NGZ9 312 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 FAM3DQ96BQ1 224 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 POFUT1Q9H488 388 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 KLK4Q9Y5K2 254 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 DICER1Q9UPY3 1922 aaKnown RBP8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 DHRS3O75911 302 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 CELA3AP09093 270 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 MMP7P09237 267 aaPredicted RBP8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 GALR1P47211 349 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 OR52B4Q8NGK2 314 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 OR56B4Q8NH76 319 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 ASCL3Q9NQ33 180 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 TOXO94900 526 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 SNAP29O95721 258 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 CA5AP35218 305 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 TEX30Q5JUR7 227 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 FNDC7Q5VTL7 733 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 CBLN3Q6UW01 205 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 LIAT1Q6ZQX7 453 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 MITD1Q8WV92 249 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 NRIP3Q9NQ35 241 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 EP300Q09472 2414 aaPredicted RBP8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 HPGDSO60760 199 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 ETV4P43268 484 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 MRPS34P82930 218 aaKnown RBP8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 TIGITQ495A1 244 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 SEZ6L2Q6UXD5 910 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 OR10P1Q8NGE3 313 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 OR13C8Q8NGS7 320 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 GHSRQ92847 366 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 SEH1LQ96EE3 360 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 C16orf92Q96LL3 132 aa8.03□□□□□ -1.12
LIMCH1-202ENST00000381753 A0A1W2PPE3 182 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 NTN3O00634 580 aaPredicted RBP8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 ACKR3P25106 362 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 NCS1P62166 190 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 SLC17A1Q14916 467 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 ZNF385CQ66K41 422 aaPredicted RBP8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 STHQ8IWL8 128 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 ABHD12Q8N2K0 398 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 DUS3LQ96G46 650 aaKnown RBP8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 MMP26Q9NRE1 261 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 SLC6A13Q9NSD5 602 aa8.02□□□□□ -1.12
LIMCH1-202ENST00000381753 BRWD1Q9NSI6 2320 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 IMPA2O14732 288 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 ETV6P41212 452 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 BTG1P62324 171 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 ZFP82Q8N141 532 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 EEF1AKMT3Q96AZ1 226 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 AKIRIN1Q9H9L7 192 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 ZMAT3Q9HA38 289 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 MYO10Q9HD67 2058 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 IGLV3-16A0A075B6K0 115 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 BLOC1S1P78537 153 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 PLPPR5Q32ZL2 321 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 AMMECR1LQ6DCA0 310 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 TRPM6Q9BX84 2022 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 J3QT63 122 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 UPK3AO75631 287 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 HTR1FP30939 366 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF181Q2M3W8 571 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 IL17RELQ6ZVW7 336 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 NCCRP1Q6ZVX7 275 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 NR2C2APQ86WQ0 139 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 ABCA7Q8IZY2 2146 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 SUMF2Q8NBJ7 301 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 OR1L1Q8NH94 360 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 RAB40AQ8WXH6 277 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 MUS81Q96NY9 551 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 NRTNQ99748 197 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 SH3BGRL3Q9H299 93 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms