RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 C6orf183Q5T699 404 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 AADACL3Q5VUY0 350 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 TMEM211Q6ICI0 200 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 C11orf87Q6NUJ2 197 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF546Q86UE3 836 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 SLC51BQ86UW2 128 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 MKXQ8IYA7 352 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF611Q8N823 705 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 OR5A2Q8NGI9 324 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CASTOR1Q8WTX7 329 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 TMEM230Q96A57 120 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 HIST1H2AAQ96QV6 131 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 PAPOLGQ9BWT3 736 aaKnown RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF286AQ9HBT8 521 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 DECR2Q9NUI1 292 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 PRSS50Q9UI38 385 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 AK3Q9UIJ7 227 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 GPR160Q9UJ42 338 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ST3GAL6Q9Y274 331 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 MPC1Q9Y5U8 109 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 RPS10-NUDT3A0A1W2PQS6 291 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF503-AS2A6NEH8 195 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 IL18BPO95998 194 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 PLATP00750 562 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 CTSDP07339 412 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 FCGR3AP08637 254 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 PGAM2P15259 253 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 FUT3P21217 361 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 CALCRP30988 508 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 UBA52P62987 128 aaKnown RBP9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 TGFBR3Q03167 851 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 MRPL49Q13405 166 aaKnown RBP9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 SRSF7Q16629 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 LINC00596Q86U02 117 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 FBXL14Q8N1E6 418 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 KCNRGQ8N5I3 272 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 FDCSPQ8NFU4 85 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 OR10AD1Q8NGE0 317 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 THAP6Q8TBB0 222 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 SCARB1Q8WTV0 552 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 MARVELD3Q96A59 401 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 SARAFQ96BY9 339 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 SULT4A1Q9BR01 284 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 RTBDNQ9BSG5 229 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 FAAP24Q9BTP7 215 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 PLK3Q9H4B4 646 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 C12orf49Q9H741 205 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF230Q9UIE0 474 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 TNFSF18Q9UNG2 199 aa9.02□□□□□ -0.97
POLR2J3-201ENST00000379340 USP9YO00507 2555 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 OR5B21A6NL26 309 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 ANKRD30BLA7E2S9 258 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 SDCBPO00560 298 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 GEMIN2O14893 280 aaKnown RBP9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 CEACAM4O75871 244 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 SFTPBP07988 381 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 AP2S1P53680 142 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 TBC1D28Q2M2D7 210 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 MPV17LQ2QL34 196 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 DHRS11Q6UWP2 260 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 CLEC18BQ6UXF7 455 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 ACOT7LQ6ZUV0 252 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 SLC25A26Q70HW3 274 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 KCTD9Q7L273 389 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 CALHM1Q8IU99 346 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 PPP1R1CQ8WVI7 109 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 BOD1Q96IK1 185 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF2Q9BSG1 426 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 RHOFQ9HBH0 211 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 C12orf4Q9NQ89 552 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 STARD10Q9Y365 291 aa9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 UTP20O75691 2785 aaKnown RBP9.01□□□□□ -0.97
POLR2J3-201ENST00000379340 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 C5orf51A6NDU8 294 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 CD300LBA8K4G0 201 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 FAM25EA8MYX2 175 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 LEUTXA8MZ59 168 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 TRAPPC2LH3BP13 241 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 CCSO14618 274 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 CFDP00746 253 aaPredicted RBP9□□□□□ -0.97
POLR2J3-201ENST00000379340 CRHP06850 196 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 OR5H8P0DN80 308 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 PRSS12P56730 875 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 FGF12P61328 243 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 PIGYQ3MUY2 71 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF660Q6AZW8 331 aaPredicted RBP9□□□□□ -0.97
POLR2J3-201ENST00000379340 TFAP2EQ6VUC0 442 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 Q6ZS49 121 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 MDP1Q86V88 176 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF573Q86YE8 665 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 SLC30A7Q8NEW0 376 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 HPSE2Q8WWQ2 592 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 MAFIPQ8WZ33 124 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF75AQ96N20 296 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 VRK1Q99986 396 aaPredicted RBP9□□□□□ -0.97
POLR2J3-201ENST00000379340 CHMP1AQ9HD42 196 aaPredicted RBP9□□□□□ -0.97
POLR2J3-201ENST00000379340 MED9Q9NWA0 146 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 C1orf123Q9NWV4 160 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 MEMO1Q9Y316 297 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms