RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 RTL8AQ9BWD3 113 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 ZNF701Q9NV72 531 aaPredicted RBP15.66■□□□□ 0.1
USP39-201ENST00000323701 F5H5P2 479 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 C16orf97H3BN30 126 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 CDIPTO14735 213 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 GZMKP49863 264 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 MECP2P51608 486 aaKnown RBP15.66■□□□□ 0.1
USP39-201ENST00000323701 IL24Q13007 206 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 MBNL2Q5VZF2 373 aaKnown RBP15.66■□□□□ 0.1
USP39-201ENST00000323701 RND1Q92730 232 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 A0A1B0GUH1 482 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 SDCBPO00560 298 aaPredicted RBP15.65■□□□□ 0.1
USP39-201ENST00000323701 TIMM8AO60220 97 aaPredicted RBP15.65■□□□□ 0.1
USP39-201ENST00000323701 PDCD6O75340 191 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 THBDP07204 575 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 GRPP07492 148 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 PRKACAP17612 351 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 GMFBP60983 142 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 NKX6-1P78426 367 aaPredicted RBP15.65■□□□□ 0.1
USP39-201ENST00000323701 MAB21L1Q13394 359 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 OR8G1Q15617 311 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 ZNF718Q3SXZ3 478 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 GLDNQ6ZMI3 551 aaPredicted RBP15.65■□□□□ 0.1
USP39-201ENST00000323701 MICU1Q9BPX6 476 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 TMEM100Q9NV29 134 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 VSIG4Q9Y279 399 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 J3QT63 122 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 CRYAAP02489 173 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 C1QBP02746 253 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 AMY2BP19961 511 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 MEF2DQ14814 521 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 ATPAF1Q5TC12 328 aaPredicted RBP15.65■□□□□ 0.1
USP39-201ENST00000323701 VHLLQ6RSH7 139 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 ZNF826PQ6ZT77 177 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 ZFAND1Q8TCF1 268 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 MED28Q9H204 178 aa15.65■□□□□ 0.1
USP39-201ENST00000323701 HSPB6O14558 160 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 CA11O75493 328 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 FUT3P21217 361 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 SNTB1Q13884 538 aaKnown RBP15.64■□□□□ 0.09
USP39-201ENST00000323701 MPPED2Q15777 294 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 C5orf24Q7Z6I8 188 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 C11orf53Q8IXP5 236 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 PKIBQ9C010 78 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 SLA2Q9H6Q3 261 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 SLC2A8Q9NY64 477 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 ELOVL5Q9NYP7 299 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 DUSP13Q9UII6 198 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 OSGIN2Q9Y236 505 aa15.64■□□□□ 0.09
USP39-201ENST00000323701 IGSF10Q6WRI0 2623 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 LRP5LA4QPB2 252 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 CD40P25942 277 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 ERP29P30040 261 aaKnown RBP15.63■□□□□ 0.09
USP39-201ENST00000323701 GCH1P30793 250 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 CA7P43166 264 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 UBE2MP61081 183 aaKnown RBP15.63■□□□□ 0.09
USP39-201ENST00000323701 NHLRC3Q5JS37 347 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 RGS7BPQ6MZT1 257 aaPredicted RBP15.63■□□□□ 0.09
USP39-201ENST00000323701 UNQ6126/PRO20091Q6UXV3 157 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 ST6GALNAC3Q8NDV1 305 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 CMSS1Q9BQ75 279 aaKnown RBP15.63■□□□□ 0.09
USP39-201ENST00000323701 PCDHB16Q9NRJ7 776 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 SCP2D1Q9UJQ7 156 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 PLEKHA6Q9Y2H5 1048 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 DIDO1Q9BTC0 2240 aaKnown RBP15.63■□□□□ 0.09
USP39-201ENST00000323701 DISC1C4P0D8 188 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 ZNF205O95201 554 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 FCGR3AP08637 254 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 CBX5P45973 191 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 LAMTOR1Q6IAA8 161 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 TMED4Q7Z7H5 227 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 KDF1Q8NAX2 398 aaPredicted RBP15.63■□□□□ 0.09
USP39-201ENST00000323701 TMEM171Q8WVE6 324 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 ING3Q9NXR8 418 aa15.63■□□□□ 0.09
USP39-201ENST00000323701 ERVK11-1P61568 191 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 IKZF1Q13422 519 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 ARL6IP1Q15041 203 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 CDSNQ15517 529 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 C3orf36Q3SXR2 165 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 SPRNQ5BIV9 151 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 FAM209AQ5JX71 171 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 PRAMEF6Q5VXH4 476 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 WFDC8Q8IUA0 241 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 FAM58AQ8N1B3 248 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 PRRT1Q99946 306 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 SYT3Q9BQG1 590 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 CHD3Q12873 2000 aaKnown RBP15.62■□□□□ 0.09
USP39-201ENST00000323701 TMEM82A0PJX8 343 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 ZNF250P15622 560 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 TBPP20226 339 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 SNRPD2P62316 118 aaKnown RBP15.62■□□□□ 0.09
USP39-201ENST00000323701 VAX1Q5SQQ9 334 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 OR13G1Q8NGZ3 307 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 SLC25A21Q9BQT8 299 aaPredicted RBP15.62■□□□□ 0.09
USP39-201ENST00000323701 ZNF442Q9H7R0 627 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 RCC2Q9P258 522 aaKnown RBP15.62■□□□□ 0.09
USP39-201ENST00000323701 ZNF69Q9UC07 566 aa15.62■□□□□ 0.09
USP39-201ENST00000323701 DPRXA6NFQ7 191 aa15.61■□□□□ 0.09
USP39-201ENST00000323701 SSNA1O43805 119 aa15.61■□□□□ 0.09
USP39-201ENST00000323701 PRAF2O60831 178 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms