RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RAB35Q15286 201 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 TMEM42Q69YG0 159 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 ADAM5Q6NVV9 412 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 TMEM182Q6ZP80 229 aaPredicted RBP16.57■□□□□ 0.24
RTN4-201ENST00000317610 LHFPL2Q6ZUX7 228 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 CCDC71LQ8N9Z2 235 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 OR8G5Q8NG78 346 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 CD300LFQ8TDQ1 290 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 DYRK2Q92630 601 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 BCO1Q9HAY6 547 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 ZNF286AQ9HBT8 521 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 IL36GQ9NZH8 169 aa16.57■□□□□ 0.24
RTN4-201ENST00000317610 NQO2P16083 231 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 S100PP25815 95 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 RBP2P50120 134 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 RPS23P62266 143 aaKnown RBP16.56■□□□□ 0.24
RTN4-201ENST00000317610 C20orf196Q8IYI0 205 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 MAML2Q8IZL2 1156 aaPredicted RBP16.56■□□□□ 0.24
RTN4-201ENST00000317610 ZNF565Q8N9K5 539 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 ZIC4Q8N9L1 334 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 OR2AE1Q8NHA4 323 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 FAM213BQ8TBF2 198 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 IGKV1-12A0A0C4DH73 117 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 GEMIN2O14893 280 aaKnown RBP16.56■□□□□ 0.24
RTN4-201ENST00000317610 PPIHO43447 177 aaKnown RBP16.56■□□□□ 0.24
RTN4-201ENST00000317610 SYNGR3O43761 229 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 IGKV1D-12P01611 117 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 POLR2GP62487 172 aaKnown RBP eCLIP16.56■□□□□ 0.24
RTN4-201ENST00000317610 GNMTQ14749 295 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 OR8B8Q15620 311 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 OR11L1Q8NGX0 322 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 UCN2Q96RP3 112 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 ULBP2Q9BZM5 246 aa16.56■□□□□ 0.24
RTN4-201ENST00000317610 VCANP13611 3396 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 IGHV3-15A0A0B4J1V0 119 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 PHF1O43189 567 aaPredicted RBP16.55■□□□□ 0.24
RTN4-201ENST00000317610 CDS2O95674 445 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 OR13C7P0DN81 318 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 PIGYQ3MUY2 71 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 HEPN1Q6WQI6 88 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 OSR2Q8N2R0 312 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 SLC35G3Q8N808 338 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 BORCS8Q96FH0 119 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 MIOXQ9UGB7 285 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 KIAA1549Q9HCM3 1950 aa16.55■□□□□ 0.24
RTN4-201ENST00000317610 IFNA17P01571 189 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 SRFP11831 508 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 KRTAP27-1Q3LI81 207 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 SOHLH1Q5JUK2 328 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 FBXL14Q8N1E6 418 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 OR2C3Q8N628 320 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 SUMF2Q8NBJ7 301 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 ZNF837Q96EG3 531 aaPredicted RBP16.54■□□□□ 0.24
RTN4-201ENST00000317610 TP53RKQ96S44 253 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 TMPRSS5Q9H3S3 457 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 RARRES3Q9UL19 164 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 PITX3O75364 302 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 CYC1P08574 325 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 GLI4P10075 376 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 OR2B8PP59922 312 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 SRPXP78539 464 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 ZNF266Q14584 549 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 HIKESHIQ53FT3 197 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 FAM209BQ5JX69 171 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 SP5Q6BEB4 398 aaPredicted RBP16.54■□□□□ 0.24
RTN4-201ENST00000317610 Q6ZPA2 131 aa16.54■□□□□ 0.24
RTN4-201ENST00000317610 OR2C1O95371 312 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 IGHV2-70P01814 119 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 AADACP22760 399 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 SPSB3Q6PJ21 355 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 ZNF100Q8IYN0 542 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 GPR137CQ8N3F9 429 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 RARRES2Q99969 163 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 ASCC3Q8N3C0 2202 aaKnown RBP16.53■□□□□ 0.24
RTN4-201ENST00000317610 MED19A0JLT2 244 aaPredicted RBP16.53■□□□□ 0.24
RTN4-201ENST00000317610 FAM221AA4D161 298 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 BTBD17A6NE02 478 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 TRDCB7Z8K6 153 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 PDCD6O75340 191 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 COL19A1Q14993 1142 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 TMEM211Q6ICI0 200 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 BRICD5Q6PL45 260 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 OR1F12Q8NHA8 337 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 MUCL1Q96DR8 90 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 PLSCR2Q9NRY7 297 aa16.53■□□□□ 0.24
RTN4-201ENST00000317610 PTRH2Q9Y3E5 179 aaKnown RBP16.53■□□□□ 0.24
RTN4-201ENST00000317610 IGSF23A1L1A6 192 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 MPPED1O15442 326 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 TXNL1O43396 289 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 ZIC3O60481 467 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 CST2P09228 141 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 LIFP15018 202 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 ATP6V0CP27449 155 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 AFF3P51826 1226 aaKnown RBP16.52■□□□□ 0.24
RTN4-201ENST00000317610 HERV-K104P61576 105 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 EXT1Q16394 746 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 FAM185AQ8N0U4 392 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 DNASE2BQ8WZ79 361 aa16.52■□□□□ 0.24
RTN4-201ENST00000317610 TRAV20A0A0B4J274 112 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 C3orf85A0A1B0GTC6 90 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms