RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 EPXP11678 715 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 GFRA1P56159 465 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 WNT3P56703 355 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 OR2F1Q13607 317 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 HLXQ14774 488 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 P2RY6Q15077 328 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 CCDC190Q86UF4 302 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 OR1B1Q8NGR6 318 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 MSL2Q9HCI7 577 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 ZNF727A8MUV8 499 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 DNPH1O43598 174 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 ID1P41134 155 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 GUCA2AQ02747 115 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 C12orf73Q69YU5 71 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 MAMSTRQ6ZN01 415 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 ADAMTS17Q8TE56 1095 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 DNASE2BQ8WZ79 361 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 MARC2Q969Z3 335 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 RABAC1Q9UI14 185 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 B3GALNT1O75752 331 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 CELA2AP08217 269 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 ORM2P19652 201 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 PSG6Q00889 435 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 SLC25A35Q3KQZ1 300 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 ATG4DQ86TL0 474 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 CELF2-AS1Q8N7Q2 184 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 NECAP1Q8NC96 275 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 DERL3Q96Q80 235 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 DOK5Q9P104 306 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 C3orf85A0A1B0GTC6 90 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 DCTN6O00399 190 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 GYPAP02724 150 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 GZMHP20718 246 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 FCER1GP30273 86 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 CCL8P80075 99 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 FAM3AP98173 230 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 CDK5Q00535 292 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 ARRDC1Q8N5I2 433 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 ZG16BQ96DA0 208 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 AUNIPQ9H7T9 357 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 UQCC1Q9NVA1 299 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 RNF115Q9Y4L5 304 aa6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 PRRC2BQ5JSZ5 2229 aaKnown RBP6.1□□□□□ -1.43
GAPVD1-202ENST00000297933 TSTD3H0UI37 97 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 H7BYZ3 331 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 NUPL2O15504 423 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 NTN1O95631 604 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 PEBP1P30086 187 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 COL19A1Q14993 1142 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 GUCA2BQ16661 112 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 ATP1A1-AS1Q5TC04 95 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 WNT2BQ93097 391 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 HGDQ93099 445 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 CTDSP1Q9GZU7 261 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 RGPD3A6NKT7 1758 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 LNP1A1A4G5 178 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 OIP5O43482 229 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 FOXS1O43638 330 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 PDGFAP04085 211 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 UBE2MP61081 183 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 ENDOGQ14249 297 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 ETFDHQ16134 617 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 RPUSD3Q6P087 351 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 RNF165Q6ZSG1 346 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 DUSP18Q8NEJ0 188 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 OR1L1Q8NH94 360 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 LILRB1Q8NHL6 650 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 SCARB1Q8WTV0 552 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 FLYWCH2Q96CP2 140 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 SLC17A5Q9NRA2 495 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM74BQ9NUR3 256 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 ADAMTSL1Q8N6G6 1762 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 A0A1W2PPV9 198 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 LOXL3P58215 753 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 TAGLNQ01995 201 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 SP6Q3SY56 376 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 TMEM128Q5BJH2 165 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 FFAR4Q5NUL3 377 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 FAM162BQ5T6X4 162 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 C1QL3Q5VWW1 255 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 H3F3CQ6NXT2 135 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 DGAT2L6Q6ZPD8 337 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 NHLRC2Q8NBF2 726 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 OR4C16Q8NGL9 310 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 ZNF596Q8TC21 504 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 Q8WTZ3 238 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 LINC00052Q96N35 136 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 RBM14Q96PK6 669 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 RAB33BQ9H082 229 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 SLC6A13Q9NSD5 602 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 URGCP-MRPS24S4R325 110 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 TRDCB7Z8K6 153 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 FAM106CPP0CH98 169 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 ACP1P24666 158 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 DCTDP32321 178 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 MAGEB1P43366 347 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 MMDQ15546 238 aa6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 MRM1Q6IN84 353 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-202ENST00000297933 C17orf47Q8NEP4 570 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms