RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 OPN1MWP04001 364 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 OPN1MW2P0DN77 364 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 OPN1MW3P0DN78 364 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 DNASE1L1P49184 302 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 IDH3GP51553 393 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 LINC00114Q6XXX2 140 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 MRPL52Q86TS9 123 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 DTWD2Q8NBA8 298 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 THAP3Q8WTV1 239 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 SPACA5Q96QH8 159 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 MPDZO75970 2070 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 SCDO00767 359 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 B3GALT2O43825 422 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 FGF17O60258 216 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 GLI4P10075 376 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 IGFBP4P22692 258 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 CCKARP32238 428 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 RBMXP38159 391 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 KLF3P57682 345 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 QRFPP83859 136 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 TAF9Q16594 264 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 VAX1Q5SQQ9 334 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 SP5Q6BEB4 398 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 LHFPL1Q86WI0 220 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 OR10S1Q8NGN2 331 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 ZFYVE21Q9BQ24 234 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 PCGF1Q9BSM1 259 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 FAM60AQ9NP50 221 aa13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 MKKSQ9NPJ1 570 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 DNAJB12Q9NXW2 375 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-201ENST00000273062 E5RGE8 158 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 SOCS1O15524 211 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 GPR137BO60478 399 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 DBHP09172 617 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 CTXN1P60606 82 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 EXOSC7Q15024 291 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 SP6Q3SY56 376 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 C1orf100Q5SVJ3 147 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 CALHM1Q8IU99 346 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 TMEM242Q9NWH2 141 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 C1orf123Q9NWV4 160 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 YLPM1P49750 1951 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 B4DEV8 164 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 TMEM238C9JI98 176 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 TNFP01375 233 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 YPEL5P62699 121 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 RPS4XP62701 263 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 RUNX1Q01196 453 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 OTOSQ8NHW6 89 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 TMEM170AQ8WVE7 144 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 OR8B4Q96RC9 309 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 ST6GALNAC5Q9BVH7 336 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 P4HTMQ9NXG6 502 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 ZNF319Q9P2F9 582 aa13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 MRPS28Q9Y2Q9 187 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-201ENST00000273062 A0A1W2PP11 408 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 PPP5D1E7EU14 171 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 PFN1P07737 140 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 CPMP14384 443 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 ATP6V1FQ16864 119 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 C1orf185Q5T7R7 199 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 IL22RA1Q8N6P7 574 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 NKAIN3Q8N8D7 197 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 OR5H2Q8NGV7 314 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 OR14L1PQ8NHC6 308 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 BAHD1Q8TBE0 780 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 RERGQ96A58 199 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 ACY3Q96HD9 319 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 MS4A10Q96PG2 267 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 C20orf144Q9BQM9 153 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 ANGPTL4Q9BY76 406 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 VN1R1Q9GZP7 353 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 NSG1A0A0A6YYJ2 146 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 B4DGG1 531 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 GALR2O43603 387 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 TNFSF13O75888 250 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 HLA-DQA2P01906 255 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 FSTP19883 344 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 OMGP23515 440 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 GABRA3P34903 492 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 ENDOGQ14249 297 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 OR8G2PQ6IF36 304 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 OR52M1Q8NGK5 317 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 IFI44Q8TCB0 444 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 MRGPRDQ8TDS7 321 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 GNG13Q9P2W3 67 aa13.73□□□□□ -0.21
CTDSP1-201ENST00000273062 SPTY2D1-AS1A0A0U1RR47 76 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 HCRTR2O43614 444 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 AGR2O95994 175 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 CT62P0C5K7 136 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 TLE1Q04724 770 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 ZP2Q05996 745 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 RTP5Q14D33 572 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 CST9LP1Q5W188 147 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 KIAA0895LQ68EN5 471 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 DGAT2L6Q6ZPD8 337 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 C16orf82Q7Z2V1 217 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 C10orf53Q8N6V4 93 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms