RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PLPP3O14495 311 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 PNLIPP16233 465 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 CHRNA7P36544 502 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF581Q9P0T4 197 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 MCTS1Q9ULC4 181 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 IGHV3-64DA0A0J9YX35 117 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 BGLAPP02818 100 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 PMP22Q01453 160 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 RTP5Q14D33 572 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 ISXQ2M1V0 245 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 RTL6Q6ICC9 239 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF574Q6ZN55 896 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 DTD1Q8TEA8 209 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 TRBV6-7A0A0A0MS04 114 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 DBX1A6NMT0 343 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 ADAM20O43506 726 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 APOBEC1P41238 236 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 PRAMEF20Q5VT98 475 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 TOMM20LQ6UXN7 152 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 H1FNTQ75WM6 255 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 HIST1H2AAQ96QV6 131 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 METTL7AQ9H8H3 244 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 PAM16Q9Y3D7 125 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 IGHV3-15A0A0B4J1V0 119 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 FOXK1P85037 733 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF664Q8N3J9 261 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 TMEM234Q8WY98 164 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 SLC2A9Q9NRM0 540 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 PCNX3Q9H6A9 2034 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 CEP250Q9BV73 2442 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 TLCD2A6NGC4 264 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 IGFBP3P17936 291 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 OR5I1Q13606 314 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 TM4SF19Q96DZ7 209 aa13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 FAM103A1Q9BTL3 118 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-201ENST00000261897 TCF21O43680 179 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF41P51814 821 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 IL22RA1Q8N6P7 574 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 SRPK3Q9UPE1 567 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 SMIM10L1P0DMW3 83 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 RPS2P15880 293 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 ROM1Q03395 351 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 DMRTA1Q5VZB9 504 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 ABHD5Q8WTS1 349 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 BORCS8Q96FH0 119 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 SMIM10Q96HG1 83 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 SLC25A31Q9H0C2 315 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 NECAP2Q9NVZ3 263 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 GOLT1BQ9Y3E0 138 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 CBY1Q9Y3M2 126 aa13.96□□□□□ -0.17
PRPF40B-201ENST00000261897 M0R143 59 aa13.96□□□□□ -0.18
PRPF40B-201ENST00000261897 GAPDHP04406 335 aaKnown RBP13.96□□□□□ -0.18
PRPF40B-201ENST00000261897 WNT5AP41221 380 aa13.96□□□□□ -0.18
PRPF40B-201ENST00000261897 PAX5Q02548 391 aa13.96□□□□□ -0.18
PRPF40B-201ENST00000261897 LMX1AQ8TE12 382 aa13.96□□□□□ -0.18
PRPF40B-201ENST00000261897 PIGCQ92535 297 aa13.96□□□□□ -0.18
PRPF40B-201ENST00000261897 DUSP15Q9H1R2 295 aaPredicted RBP13.96□□□□□ -0.18
PRPF40B-201ENST00000261897 C5orf63A6NC05 138 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 PATE4P0C8F1 98 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 FSTP19883 344 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 CLDN17P56750 224 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 P2RY6Q15077 328 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 PCGF1Q9BSM1 259 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 NAA60Q9H7X0 242 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 ZNF319Q9P2F9 582 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 KCNS2Q9ULS6 477 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 MYO15AQ9UKN7 3530 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 LOC102724200A0A096LPH7 203 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 TFPI2P48307 235 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 FAM189A2Q15884 450 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 VAX1Q5SQQ9 334 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 GRINAQ7Z429 371 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 KDF1Q8NAX2 398 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 TMEM68Q96MH6 324 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 EGLN1Q9GZT9 426 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 UCK1Q9HA47 277 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 MT-ATP6P00846 226 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 METTL15P1P0C7V9 234 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 HNRNPA2B1P22626 353 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 TMEM41BQ5BJD5 291 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 FBXL14Q8N1E6 418 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 DCAF16Q9NXF7 216 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 ANXA10Q9UJ72 324 aa13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 FOXD3Q9UJU5 478 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-201ENST00000261897 TMEM14DPA8MWL7 114 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 CD55P08174 381 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 CST2P09228 141 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 NTSR1P30989 418 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 FAM3BP58499 235 aaPredicted RBP13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 PIGYQ3MUY2 71 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 OR13D1Q8NGV5 346 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 LHX4Q969G2 390 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 SAMD10Q9BYL1 202 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 OR51B6Q9H340 312 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 SLC39A9Q9NUM3 307 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 RALGAPA1Q6GYQ0 2036 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 ELOA3CA0A087WX78 387 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms