RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 FAM90A10PA6NDY2 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A18PA6NE21 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A16PA6NEW6 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A8PA6NJQ4 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A7PA6NKC0 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A22PA8MWA6 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SNRPGP15A8MWD9 76 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A12PA8MX19 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A5PA8MXJ8 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A23PA8MXZ1 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 IFNA2P01563 188 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 THY1P04216 161 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A15PP0C7V4 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A13PP0C7W8 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A14PP0C7W9 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM90A24PP0C7X0 464 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 PI4KAP42356 2102 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 HIKESHIQ53FT3 197 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 MEX3BQ6ZN04 569 aaKnown RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 SLC16A12Q6ZSM3 486 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 NAA40Q86UY6 237 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 OR10K1Q8NGX5 313 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 GIMAP1Q8WWP7 306 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 RDH5Q92781 318 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 ERGIC1Q969X5 290 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SRRQ9GZT4 340 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 MMP28Q9H239 520 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 GAL3ST2Q9H3Q3 398 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 RNF167Q9H6Y7 350 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 LSM2Q9Y333 95 aaKnown RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 FBXO7Q9Y3I1 522 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 CACNA1CQ13936 2221 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 TRBV5-5A0A0J9YX44 114 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 hADV38S2A0JD32 116 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 TRIM64A6NGJ6 449 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 OR5H1A6NKK0 313 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 CDRT15L2A8MXV6 281 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SIRPB1O00241 398 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 NTN1O95631 604 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 IL18BPO95998 194 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 IFNA1P01562 189 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 EIF4EP06730 217 aaKnown RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 RFPL3SP0C7P2 107 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 OR5H8P0DN80 308 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 RAB7AP51149 207 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 UCP2P55851 309 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 DBPQ10586 325 aaPredicted RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 LINC01590Q5TEZ4 76 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SHISA2Q6UWI4 295 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 MRGPRGQ86SM5 289 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 LRRC75AQ8NAA5 344 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 OR2AK2Q8NG84 335 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SGK3Q96BR1 496 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 ARL6Q9H0F7 186 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 C20orf85Q9H1P6 137 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 DLL4Q9NR61 685 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 ZNF629Q9UEG4 869 aaPredicted RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 ZDHHC8Q9ULC8 765 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SPTBP11277 2137 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 IGKV3D-15A0A087WSY6 115 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 CDC14BO60729 498 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SS18L1O75177 396 aaPredicted RBP4.82□□□□□ -1.64
CHD2-227ENST00000637572 B3GALNT1O75752 331 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 TTRP02766 147 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM87AP0C7U9 286 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 IL11P20809 199 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 LHX2P50458 406 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 IL13RA2Q14627 380 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 LRRC37A5PQ49AS3 106 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 FAM27D1Q5T7N8 215 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 CD200R1LQ6Q8B3 271 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SKA3Q8IX90 412 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 PXT1Q8NFP0 134 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 GPX8Q8TED1 209 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 WDYHV1Q96HA8 205 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 ZNF75AQ96N20 296 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 SPACA5Q96QH8 159 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 KCNIP2Q9NS61 270 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 RNF7Q9UBF6 113 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 MTFP1Q9UDX5 166 aa4.82□□□□□ -1.64
CHD2-227ENST00000637572 CSPG4Q6UVK1 2322 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 A0A0D9SG52 128 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 BTBD17A6NE02 478 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 B8ZZF3 427 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 HSPB6O14558 160 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 PMP2P02689 132 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 CLPSP04118 112 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 PATE4P0C8F1 98 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 CLDN18P56856 261 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 RRAS2P62070 204 aaPredicted RBP4.81□□□□□ -1.64
CHD2-227ENST00000637572 RTL8BQ17RB0 113 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 ACSF3Q4G176 576 aaPredicted RBP4.81□□□□□ -1.64
CHD2-227ENST00000637572 RFPL4BQ6ZWI9 263 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 COMTD1Q86VU5 262 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 CXorf67Q86X51 503 aaPredicted RBP4.81□□□□□ -1.64
CHD2-227ENST00000637572 SAXO1Q8IYX7 474 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 SLC38A6Q8IZM9 456 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 ZDHHC22Q8N966 263 aa4.81□□□□□ -1.64
CHD2-227ENST00000637572 OR52N4Q8NGI2 321 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms