RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RLN1P04808 185 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 ERCC1P07992 297 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 CD14P08571 375 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 TACSTD2P09758 323 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 COX5BP10606 129 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 UMPSP11172 480 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 IFI30P13284 250 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 HSD17B1P14061 328 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 B4GALT1P15291 398 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF250P15622 560 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 PTNP21246 168 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 USF1P22415 310 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 TUBG1P23258 451 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 AQP2P41181 271 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 RAP1BP61224 184 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 PSME3P61289 254 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 RPL27P61353 136 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 RAP1AP62834 184 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 MRPS11P82912 194 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 IL1RL1Q01638 556 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SCN1BQ07699 218 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 NPRL3Q12980 569 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SNTB2Q13425 540 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 DGCR6Q14129 220 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC36A2Q495M3 483 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 C6orf52Q5T4I8 152 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 FAM27BQ5VT28 67 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 CARD17Q5XLA6 110 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 GLYATQ6IB77 296 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC27A4Q6P1M0 643 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM53Q6P2H8 277 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 MBOAT2Q6ZWT7 520 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 Q71RC1 249 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC16A14Q7RTX9 510 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 FAM122BQ7Z309 247 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 TSEN54Q7Z6J9 526 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 VTCN1Q7Z7D3 282 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 NRMQ8IXM6 262 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 PGAM4Q8N0Y7 254 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF786Q8N393 782 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 POM121L12Q8N7R1 296 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 ARIH2OSQ8N7S6 290 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 PFN4Q8NHR9 129 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC7A13Q8TCU3 470 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 CORO2AQ92828 525 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 POP5Q969H6 163 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 NABP1Q96AH0 204 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 TPD52L3Q96J77 140 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 C7orf34Q96L11 122 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 RBP7Q96R05 134 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 GPX7Q96SL4 187 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 CITED2Q99967 270 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 KCTD14Q9BQ13 255 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 BCL2L14Q9BZR8 327 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 NSRP1Q9H0G5 558 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 RACGAP1Q9H0H5 632 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 FNDC4Q9H6D8 234 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 NMNAT1Q9HAN9 279 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 IL1RAPQ9NPH3 570 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 TUBG2Q9NRH3 451 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 DCAF13Q9NV06 445 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 CD300AQ9UGN4 299 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF346Q9UL40 294 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SAMD4AQ9UPU9 718 aaKnown RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 UGT2A1Q9Y4X1 527 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 POMT1Q9Y6A1 747 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 ENPP4Q9Y6X5 453 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGKV1D-43A0A0B4J1Z2 117 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 EFCAB9A8MZ26 197 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF732B4DXR9 585 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 CDC42EP2O14613 210 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 IMPA2O14732 288 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ARPC3O15145 178 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 GPRIN2O60269 458 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SHOX2O60902 331 aaPredicted RBP2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 DCTN3O75935 186 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 LY6HO94772 140 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 NDUFB2O95178 105 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF682O95780 498 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 TXNDC12O95881 172 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SERPINA1P01009 418 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 CST2P09228 141 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 CD79AP11912 226 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF32P17041 273 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 MSR1P21757 451 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 STOMP27105 288 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 GUCA1AP43080 201 aaPredicted RBP2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 OMPP47874 163 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 NPBWR1P48145 328 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 NUDT2P50583 147 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 MNAT1P51948 309 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 UCP2P55851 309 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM33P57088 247 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SMIM11AP58511 58 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 PCBD1P61457 104 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 LSM6P62312 80 aaKnown RBP2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 MYBPC1Q00872 1141 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 PSG4Q00888 419 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 GALK2Q01415 458 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 CD47Q08722 323 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms