RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 NME2P22392 152 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 LSM6P62312 80 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 RAB1AP62820 205 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 ZSCAN4Q8NAM6 433 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 OR5D14Q8NGL3 314 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 NKD1Q969G9 470 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 NABP1Q96AH0 204 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 RRNAD1Q96FB5 475 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 AQP10Q96PS8 301 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 SLC6A7Q99884 636 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 CST11Q9H112 138 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 RGCCQ9H4X1 137 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 CNTD2Q9H8S5 307 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 MOB1AQ9H8S9 216 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 ZMAT3Q9HA38 289 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 FOXD3Q9UJU5 478 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 NCOA6Q14686 2063 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 OTOGLQ3ZCN5 2332 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 C5orf63A6NC05 138 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 MED6O75586 246 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 CLDN15P56746 228 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 PKIAP61925 76 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 ENDOGQ14249 297 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 SCGB2B2Q4G0G5 96 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 HIST2H3AQ71DI3 136 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 ADGRE4PQ86SQ3 457 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 NKAIN3Q8N8D7 197 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 PNLDC1Q8NA58 520 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 LYPD6BQ8NI32 183 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 MARS2Q96GW9 593 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 ZNF845Q96IR2 970 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 SPACA5Q96QH8 159 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 S100A13Q99584 98 aa14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 BOKQ9UMX3 212 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-205ENST00000594973 CFAP47Q6ZTR5 3102 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 A0A0A6YYH2 397 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 C5orf51A6NDU8 294 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 A6NJ64 397 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 E9PLN8 166 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 GALR2O43603 387 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 CELA3AP09093 270 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 OR2B8PP59922 312 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 DMRTC1Q5HYR2 192 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 C20orf196Q8IYI0 205 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 COMMD1Q8N668 190 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 GJC3Q8NFK1 279 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 OR2V1Q8NHB1 315 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 ISOC2Q96AB3 205 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 MEGF10Q96KG7 1140 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 RHOVQ96L33 236 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 NEU1Q99519 415 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 SF3B5Q9BWJ5 86 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 FN3KRPQ9HA64 309 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 FLVCR1Q9Y5Y0 555 aa14.9□□□□□ -0.02
SHKBP1-205ENST00000594973 TAAR5O14804 337 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 KCNAB3O43448 404 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF84P51523 738 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 GRB2P62993 217 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 SRYQ05066 204 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 OR1C1Q15619 314 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 ATP1A1-AS1Q5TC04 95 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 FAM24BQ8N5W8 94 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 OR2M7Q8NG81 312 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 FAM46BQ96A09 425 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 ALKBH3Q96Q83 286 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 CRLF2Q9HC73 371 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 IFITM10A6NMD0 228 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF716A6NP11 495 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 FAM166BA8MTA8 275 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 DNPH1O43598 174 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 DDTP30046 118 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 C1orf100Q5SVJ3 147 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 PLXDC2Q6UX71 529 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 RNF144BQ7Z419 303 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 LYPD6Q86Y78 171 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 OR1J1Q8NGS3 322 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 SECTM1Q8WVN6 248 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 ADGRG7Q96K78 797 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 FAM173AQ9BQD7 235 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 DNAJB11Q9UBS4 358 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 MED13Q9UHV7 2174 aa14.89□□□□□ -0.03
SHKBP1-205ENST00000594973 CD37P11049 281 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 SERPINF1P36955 418 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 GFRA1P56159 465 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 KIAA0141Q14154 515 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 TGIF1Q15583 401 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 RSPO4Q2I0M5 234 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 MOGAT2Q3SYC2 334 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 PRSS54Q6PEW0 395 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 SULF2Q8IWU5 870 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 SUMF1Q8NBK3 374 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 ACBD4Q8NC06 268 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 ABHD3Q8WU67 409 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 PGAM5Q96HS1 289 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 IP6K3Q96PC2 410 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 PLEK2Q9NYT0 353 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 ABI3Q9P2A4 366 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 STARD10Q9Y365 291 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 LRP3O75074 770 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms