RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 PRKACBP22694 351 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 NPBWR2P48146 333 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 ETV1P50549 477 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 GTF2A1P52655 376 aaPredicted RBP18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 MTCP1P56278 107 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 GUCA2AQ02747 115 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 COL10A1Q03692 680 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 MRPL28Q13084 256 aaKnown RBP18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 TTC23Q5W5X9 447 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 TMEM200BQ69YZ2 307 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 PNKDQ8N490 385 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 OPALINQ96PE5 141 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 FAM234AQ9H0X4 552 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 METTL8Q9H825 291 aaKnown RBP18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 TNFRSF19Q9NS68 423 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 A0A1W2PRD5 423 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 A0A1W2PRF3 423 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 A0A1W2PRM7 423 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 TMEM212A6NML5 194 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 K7N7A8 449 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 CASQ2O14958 399 aaPredicted RBP18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 SPRY1O43609 319 aaPredicted RBP18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 POU3F4P49335 361 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 RPL31P62899 125 aaKnown RBP18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 FOXL1Q12952 345 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 OGFRL1Q5TC84 451 aaPredicted RBP18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 XAF1Q6GPH4 301 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 LHFPL2Q6ZUX7 228 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 LDLRAD3Q86YD5 345 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 DHRSXQ8N5I4 330 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 TMEM86BQ8N661 226 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 OR4M1Q8NGD0 313 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 OR13C9Q8NGT0 318 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 SPSB1Q96BD6 273 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 CHIAQ9BZP6 476 aa18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 RBFOX1Q9NWB1 397 aaKnown RBP18.26■□□□□ 0.51
GTF2F1-204ENST00000594965 NPFFO15130 113 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 MT-ND2P03891 347 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 CCDC159P0C7I6 412 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 BCL3P20749 454 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 DCKP27707 260 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 GBX2P52951 348 aaPredicted RBP18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 PDZK1IP1Q13113 114 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 ZNF273Q14593 569 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 OR2G6Q5TZ20 316 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 MKXQ8IYA7 352 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 C3orf56Q8N813 242 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 OR5AK2Q8NH90 309 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 RGP1Q92546 391 aaPredicted RBP18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 EMG1Q92979 244 aaKnown RBP18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 RFT1Q96AA3 541 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 SPACA5Q96QH8 159 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 ZCCHC4Q9H5U6 513 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 FBN3Q75N90 2809 aa18.25■□□□□ 0.51
GTF2F1-204ENST00000594965 IGKV1-12A0A0C4DH73 117 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 TMEM82A0PJX8 343 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 IGKV1D-12P01611 117 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 IGHV4-59P01825 116 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 CHRM2P08172 466 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 CCL3L1P16619 93 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 IER3P46695 156 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 UBE2E1P51965 193 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 ERVFRD-1P60508 538 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 BLMHQ13867 455 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 NCR3LG1Q68D85 454 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 LAIR2Q6ISS4 152 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 FIP1L1Q6UN15 594 aaKnown RBP18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 PARP16Q8N5Y8 322 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 RPS4Y2Q8TD47 263 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 SEBOXQ9HB31 216 aaPredicted RBP18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 POMT1Q9Y6A1 747 aa18.24■□□□□ 0.51
GTF2F1-204ENST00000594965 TRBV2A0A0J9YWF9 115 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 FAM181BA6NEQ2 426 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 H0YAE9 185 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 ANGPTL7O43827 346 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 GNAO1P09471 354 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 CALCBP10092 127 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 EEF1B2P24534 225 aaKnown RBP18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 DLX6P56179 175 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 IL18R1Q13478 541 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 C17orf107Q6ZR85 190 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 Q8IYB0 196 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 FAM58AQ8N1B3 248 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 ASCC1Q8N9N2 400 aaKnown RBP18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 SETD9Q8NE22 299 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 HAVCR2Q8TDQ0 301 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 SSMEM1Q8WWF3 244 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 COMMD4Q9H0A8 199 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 ZNRD1Q9P1U0 126 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 CLEC2DQ9UHP7 191 aa18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 DIMT1Q9UNQ2 313 aaKnown RBP18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 CAB39Q9Y376 341 aaPredicted RBP18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 SIRT4Q9Y6E7 314 aaPredicted RBP18.23■□□□□ 0.51
GTF2F1-204ENST00000594965 ALX3O95076 343 aa18.22■□□□□ 0.51
GTF2F1-204ENST00000594965 HAND1O96004 215 aa18.22■□□□□ 0.51
GTF2F1-204ENST00000594965 RPSAP08865 295 aaKnown RBP18.22■□□□□ 0.51
GTF2F1-204ENST00000594965 SAA4P35542 130 aa18.22■□□□□ 0.51
GTF2F1-204ENST00000594965 CAPGP40121 348 aa18.22■□□□□ 0.51
GTF2F1-204ENST00000594965 ZNF146Q15072 292 aa18.22■□□□□ 0.51
GTF2F1-204ENST00000594965 CDK5R1Q15078 307 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms