RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CD200P41217 278 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 RFX2P48378 723 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 SSBP1Q04837 148 aaKnown RBP17.64■□□□□ 0.41
PNKP-203ENST00000593946 Q6ZNX1 250 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 ABCA4P78363 2273 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 CACNA1DQ01668 2161 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 CDIPTO14735 213 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 SSX4O60224 188 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 RBBP9O75884 186 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 PTBP3O95758 552 aaKnown RBP17.64■□□□□ 0.41
PNKP-203ENST00000593946 OR4A8P0C604 315 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 C11orf53Q8IXP5 236 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 ZNF488Q96MN9 340 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 HS3ST6Q96QI5 342 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 PECRQ9BY49 303 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 PLK3Q9H4B4 646 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 IGHV3-64DA0A0J9YX35 117 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 ANKRD20A5PA0PJZ0 165 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A10PA6NDY2 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A18PA6NE21 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A16PA6NEW6 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A20PA6NIJ5 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A8PA6NJQ4 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A7PA6NKC0 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A22PA8MWA6 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A12PA8MX19 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A5PA8MXJ8 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A23PA8MXZ1 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 ECDO95905 644 aaPredicted RBP17.63■□□□□ 0.41
PNKP-203ENST00000593946 ACAA1P09110 424 aaPredicted RBP17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A15PP0C7V4 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A13PP0C7W8 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A14PP0C7W9 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 FAM90A24PP0C7X0 464 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 PGA5P0DJD9 388 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 ERVK11-1P61568 191 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 DYRK1AQ13627 763 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 NKPD1Q17RQ9 610 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 PNLIPRP3Q17RR3 467 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 OLFML2AQ68BL7 652 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 NRARPQ7Z6K4 114 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 ST8SIA4Q92187 359 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 ELMOD3Q96FG2 381 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 CYYR1Q96J86 154 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 ZNF581Q9P0T4 197 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 HSF4Q9ULV5 492 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 RNF115Q9Y4L5 304 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 CACNG2Q9Y698 323 aa17.63■□□□□ 0.41
PNKP-203ENST00000593946 MYO18BQ8IUG5 2567 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 MEIS3P1A6NDR6 274 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 DEFB108AA8MXU0 73 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 E7EQL1 145 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 GSTT2BP0CG30 244 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 LOXP28300 417 aaPredicted RBP17.62■□□□□ 0.41
PNKP-203ENST00000593946 CHATP28329 748 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 AP3S2P59780 193 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 ACTBP60709 375 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 ACTG1P63261 375 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 ARL6IP1Q15041 203 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 MPPED2Q15777 294 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 PRAMEF6Q5VXH4 476 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 Q8IYB0 196 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 NUDCD2Q8WVJ2 157 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 COX4I2Q96KJ9 171 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 NRIP2Q9BQI9 281 aa17.62■□□□□ 0.41
PNKP-203ENST00000593946 SERPINE3A8MV23 424 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 PRSS44E7EML9 344 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 NOS1APO75052 506 aaPredicted RBP17.61■□□□□ 0.41
PNKP-203ENST00000593946 SPNP16150 400 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 ZNF81P51508 661 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 MZT2BQ6NZ67 158 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 C6orf201Q7Z4U5 140 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 FAM58AQ8N1B3 248 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 CELF2-AS1Q8N7Q2 184 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 NEUROG1Q92886 237 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 C7orf50Q9BRJ6 194 aaKnown RBP17.61■□□□□ 0.41
PNKP-203ENST00000593946 TAS2R8Q9NYW2 309 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 IL36RNQ9UBH0 155 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 ARFGEF3Q5TH69 2177 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 VSTM5A8MXK1 200 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 SSX5O60225 188 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 PRKACAP17612 351 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 GNG2P59768 71 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 PCGF3Q3KNV8 242 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 TRAPPC6BQ86SZ2 158 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 EMG1Q92979 244 aaKnown RBP17.61■□□□□ 0.41
PNKP-203ENST00000593946 PLEKHJ1Q9NW61 149 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 ZDHHC8Q9ULC8 765 aa17.61■□□□□ 0.41
PNKP-203ENST00000593946 SPRY3O43610 288 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 CA11O75493 328 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 PLAUP00749 431 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 CSF1P09603 554 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 SERPINF1P36955 418 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 MPV17LQ2QL34 196 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 WDR82Q6UXN9 313 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 ZNF826PQ6ZT77 177 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 LINC00596Q86U02 117 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 POC1AQ8NBT0 407 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 DEDD2Q8WXF8 326 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 MEGF10Q96KG7 1140 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms