RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ZNF256Q9Y2P7 627 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-215ENST00000592911 UBE2J1Q9Y385 318 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-215ENST00000592911 MOB4Q9Y3A3 225 aa6.89□□□□□ -1.31
SMAD4-215ENST00000592911 HILPDAQ9Y5L2 63 aa6.89□□□□□ -1.31
SMAD4-215ENST00000592911 HSPE1-MOB4S4R3N1 261 aa6.89□□□□□ -1.31
SMAD4-215ENST00000592911 FUOMA2VDF0 154 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 RIIAD1A6NNX1 92 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 NUDT19A8MXV4 375 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 NME4O00746 187 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 DLGAP1O14490 977 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 IGLV3-1P01715 115 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 SEMG1P04279 462 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 ERVK11-1P61568 191 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 SF3A3Q12874 501 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMAD4-215ENST00000592911 IL24Q13007 206 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 CRMP1Q14194 572 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 GK3PQ14409 553 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 KIR2DS1Q14954 304 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 SNAPC1Q16533 368 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 GFOD2Q3B7J2 385 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 SLC35F1Q5T1Q4 408 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 ZNF684Q5T5D7 378 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 TMEM42Q69YG0 159 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 Q8IYB0 196 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 ZNF676Q8N7Q3 588 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 RNF152Q8N8N0 203 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 OR4M1Q8NGD0 313 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 OR6N2Q8NGY6 317 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 OR52J3Q8NH60 311 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 ZNRF4Q8WWF5 429 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 MCUR1Q96AQ8 359 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 LYZL4Q96KX0 146 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 KCTD14Q9BQ13 255 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-215ENST00000592911 GAL3ST2Q9H3Q3 398 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 CCDC134Q9H6E4 229 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 PPP1R3EQ9H7J1 279 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 EFCAB1Q9HAE3 211 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 MED4Q9NPJ6 270 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 CMC2Q9NRP2 79 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 SLC22A13Q9Y226 551 aa6.88□□□□□ -1.31
SMAD4-215ENST00000592911 A0A087X0M5 115 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 A0A1B0GX30 115 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A18PA6NE21 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A16PA6NEW6 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A20PA6NIJ5 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A9PA6NNJ1 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A12PA8MX19 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A5PA8MXJ8 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 HMGB1P1B2RPK0 211 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-215ENST00000592911 CCL24O00175 119 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 GSC2O15499 205 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 ZNF254O75437 659 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 DHRS3O75911 302 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 IGLV1-47P01700 117 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 H2AFB1P0C5Y9 115 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 H2AFB2P0C5Z0 115 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 CCDC159P0C7I6 412 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A15PP0C7V4 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A13PP0C7W8 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A14PP0C7W9 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FAM90A24PP0C7X0 464 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 PEX2P28328 305 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 HAAOP46952 286 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 CDX1P47902 265 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-215ENST00000592911 VEGFCP49767 419 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 CDC42P60953 191 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 ESRRGP62508 458 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 SLX4IPQ5VYV7 408 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 PLCXD3Q63HM9 321 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 TEX38Q6PEX7 206 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 HEPN1Q6WQI6 88 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 TRPM8Q7Z2W7 1104 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 ERI1Q8IV48 349 aaKnown RBP6.87□□□□□ -1.31
SMAD4-215ENST00000592911 FOXRED2Q8IWF2 684 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 KLHL30-AS1Q8NEE0 82 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 OR8B12Q8NGG6 310 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 OR51L1Q8NGJ5 315 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 OR4Q3Q8NH05 313 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 UTP4Q969X6 686 aaKnown RBP6.87□□□□□ -1.31
SMAD4-215ENST00000592911 RCN3Q96D15 328 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 PYURFQ96I23 114 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 CHCHD6Q9BRQ6 235 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 MOB1AQ9H8S9 216 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 KRT84Q9NSB2 600 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 TAS2R3Q9NYW6 316 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 DNAJC27Q9NZQ0 273 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 ZNF580Q9UK33 172 aa6.87□□□□□ -1.31
SMAD4-215ENST00000592911 TNCP24821 2201 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 PQLC2LA1A4F0 135 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 CCRL2O00421 344 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 MGST3O14880 152 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 PRODHO43272 600 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 NRASP01111 189 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 IGHG2P01859 326 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 TFF1P04155 84 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 FABP3P05413 133 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 ELANEP08246 267 aa6.86□□□□□ -1.31
SMAD4-215ENST00000592911 SNRNP70P08621 437 aaKnown RBP6.86□□□□□ -1.31
SMAD4-215ENST00000592911 H2AFXP16104 143 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms