RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 MCCC2Q9HCC0 563 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 INIPQ9NRY2 104 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 PAK1IP1Q9NWT1 392 aaPredicted RBP3.32□□□□□ -1.88
TRAV15-201ENST00000556680 IL20Q9NYY1 176 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 B4GALT7Q9UBV7 327 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 PURGQ9UJV8 347 aaKnown RBP3.32□□□□□ -1.88
TRAV15-201ENST00000556680 ZNF229Q9UJW7 825 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 SIGLEC7Q9Y286 467 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 CHCHD2Q9Y6H1 151 aaPredicted RBP3.32□□□□□ -1.88
TRAV15-201ENST00000556680 COMMD3-BMI1R4GMX3 469 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 MYO7BQ6PIF6 2116 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 ZGRF1Q86YA3 2104 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 FREM1Q5H8C1 2179 aa3.32□□□□□ -1.88
TRAV15-201ENST00000556680 CACNA1CQ13936 2221 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 A0A087WZY1 265 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 IGHV3-15A0A0B4J1V0 119 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SMIM31A0A1B0GVY4 71 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 DAPL1A0PJW8 107 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 MFSD2BA6NFX1 497 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 GJE1A6NN92 205 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 FOXI3A8MTJ6 420 aaPredicted RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 ZNF670-ZNF695F2Z2N8 137 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 F8WDY8 70 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 H3BSA7 217 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 BHLHE40O14503 412 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 TNFSF11O14788 317 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 LRRTM2O43300 516 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SMPD2O60906 423 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CBR3O75828 277 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 NDUFA7O95182 113 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SNX4O95219 450 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CD14P08571 375 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SNRPCP09234 159 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 TSPAN19P0C672 248 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CLUP10909 449 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 HIST1H1CP16403 213 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CNR1P21554 472 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 PYCR1P32322 319 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 EIF1P41567 113 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 HTR5AP47898 357 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 BIDP55957 195 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 FXYD6P3P58550 94 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CXCR4P61073 352 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 LSM3P62310 102 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SLC35A2P78381 396 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SLC35A1P78382 337 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 PUDPQ08623 228 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 KRR1Q13601 381 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 EIF2B1Q14232 305 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 PCK2Q16822 640 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 TMEM176BQ3YBM2 270 aaPredicted RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 NXNL2Q5VZ03 156 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CARD17Q5XLA6 110 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 DMKNQ6E0U4 476 aaPredicted RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 TMEM225Q6GV28 225 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SPINK14Q6IE38 97 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 LAIR2Q6ISS4 152 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 H3F3CQ6NXT2 135 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 NIPAL3Q6P499 406 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 PRSS48Q7RTY5 328 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 LHFPL3Q86UP9 236 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 ERI1Q8IV48 349 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CCDC36Q8IYA8 594 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 FADS6Q8N9I5 356 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 FAM83FQ8NEG4 500 aaPredicted RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 PROKR2Q8NFJ6 384 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 OR2M7Q8NG81 312 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 OR4F15Q8NGB8 312 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 OR51L1Q8NGJ5 315 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 OR52I1Q8NGK6 324 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 OR6N2Q8NGY6 317 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SPATA3Q8NHX4 192 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 PAQR8Q8TEZ7 354 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 TRUB1Q8WWH5 349 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 MCHR2Q969V1 340 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 ZMYND19Q96E35 227 aaPredicted RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 MRPL48Q96GC5 212 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 FOXN4Q96NZ1 517 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 TSPAN32Q96QS1 320 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 SECISBP2Q96T21 854 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 NMNAT3Q96T66 252 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 MYCBPQ99417 103 aaPredicted RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CNN2Q99439 309 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 ZNF426Q9BUY5 554 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 MND1Q9BWT6 205 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 GNB4Q9HAV0 340 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 EXOSC4Q9NPD3 245 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 RPRD1BQ9NQG5 326 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 CMC2Q9NRP2 79 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 RSL24D1Q9UHA3 163 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 RNF24Q9Y225 148 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 ERGIC3Q9Y282 383 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 POLR1DQ9Y2S0 133 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 KLF13Q9Y2Y9 288 aaPredicted RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 EXOSC1Q9Y3B2 195 aaKnown RBP3.31□□□□□ -1.88
TRAV15-201ENST00000556680 VCANP13611 3396 aa3.31□□□□□ -1.88
TRAV15-201ENST00000556680 DMDP11532 3685 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms