RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 DYNLRB1Q9NP97 96 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF701Q9NV72 531 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TAAR3PQ9P1P4 343 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 STUB1Q9UNE7 303 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 RHBDD3Q9Y3P4 386 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TRAV1-2A0A0B4J238 106 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 PQLC2LA1A4F0 135 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ZSCAN5BA6NJL1 495 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM210A6NLX4 147 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 SULT1B1O43704 296 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 NRASP01111 189 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 IGHV1-46P01743 117 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ALDOBP05062 364 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 CD36P16671 472 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 RAB3AP20336 220 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 CA6P23280 308 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 TGFBR2P37173 567 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 CD200P41217 278 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ALDH3B1P43353 468 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 RANBP1P43487 201 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 SRP9P49458 86 aaKnown RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 RPS25P62851 125 aaKnown RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 PPP3R1P63098 170 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 GNG3P63215 75 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 FABP5Q01469 135 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 PRDX4Q13162 271 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 OR8G1Q15617 311 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ALKBH6Q3KRA9 238 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ACSM3Q53FZ2 586 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 FAM76BQ5HYJ3 339 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM65Q6PI78 240 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 CLEC9AQ6UXN8 241 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 Q6ZR03 302 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 DCDC5Q6ZRR9 648 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 GPR141Q7Z602 305 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 CEACAM19Q7Z692 300 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 NKAIN3Q8N8D7 197 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 Q8N9P0 234 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 BHLHE23Q8NDY6 225 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 OR2Z1Q8NG97 314 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 OR10AC1Q8NH08 325 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 OR8S1Q8NH09 359 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM203Q969S6 136 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ERGIC1Q969X5 290 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 FGGYQ96C11 551 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 YIPF6Q96EC8 236 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ADAT3Q96EY9 351 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ELMOD3Q96FG2 381 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF48Q96MX3 618 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 CCL19Q99731 98 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 MICU1Q9BPX6 476 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 BCL7BQ9BQE9 202 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ADAT1Q9BUB4 502 aaKnown RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 SLITRK2Q9H156 845 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 CXXC4Q9H2H0 198 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 MYOZ1Q9NP98 299 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM138Q9NPI0 162 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 SNTG1Q9NSN8 517 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 BEX4Q9NWD9 120 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 MYEF2Q9P2K5 600 aaKnown RBP4.84□□□□□ -1.63
SCAF11-213ENST00000550629 DNAJB11Q9UBS4 358 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 IL19Q9UHD0 177 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 FZR1Q9UM11 496 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 SSR3Q9UNL2 185 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 FOXJ3Q9UPW0 622 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 SLC7A11Q9UPY5 501 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 LAMP3Q9UQV4 416 aa4.84□□□□□ -1.63
SCAF11-213ENST00000550629 ABCA12Q86UK0 2595 aa4.84□□□□□ -1.64
SCAF11-213ENST00000550629 ICE1Q9Y2F5 2266 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 PNMA8CA0A1B0GUJ8 204 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 LRP5LA4QPB2 252 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF850A8MQ14 1090 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 GABRPO00591 440 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 MAGEB3O15480 346 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 MLNRO43193 412 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 AIREO43918 545 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 FSTL3O95633 263 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 ACAA1P09110 424 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-213ENST00000550629 OCMP0CE72 109 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-213ENST00000550629 CD37P11049 281 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 PRF1P14222 555 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 IGFBP3P17936 291 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-213ENST00000550629 ATF1P18846 271 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 SRMP19623 302 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 DNASE1P24855 282 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 CFHR2P36980 270 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 CRYBB2P43320 205 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 SOX2P48431 317 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 PSMD7P51665 324 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 FUT6P51993 359 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 EFNA4P52798 201 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 TMBIM6P55061 237 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 TNFAIP6P98066 277 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-213ENST00000550629 CFHR3Q02985 330 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 BLMHQ13867 455 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 UBE2V2Q15819 145 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF181Q2M3W8 571 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 HSD17B12Q53GQ0 312 aa4.83□□□□□ -1.64
SCAF11-213ENST00000550629 PLCXD3Q63HM9 321 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms