RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 ASPDHA6ND91 283 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 SP1P08047 785 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 SRD5A2P31213 254 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 SLC25A40Q8TBP6 338 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 SH2D2AQ9NP31 389 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 PLA2G3Q9NZ20 509 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 TRDCB7Z8K6 153 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 NME2P1O60361 137 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 CD96P40200 585 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 WNT3P56703 355 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 ABLIM2Q6H8Q1 611 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 C16orf52Q8NHV5 167 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 COMMD5Q9GZQ3 224 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 HES4Q9HCC6 221 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 PRDM7Q9NQW5 492 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 TIMM8BQ9Y5J9 83 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-211ENST00000543710 A0A1B0GV50 99 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 G3V3Y1 287 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 CEACAM5P06731 702 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 SNRPNP63162 240 aaKnown RBP6.95□□□□□ -1.3
VPS13D-211ENST00000543710 COTL1Q14019 142 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 PHLDA2Q53GA4 152 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 SLC16A12Q6ZSM3 486 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 FGF22Q9HCT0 170 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 MBNL1Q9NR56 388 aaKnown RBP6.95□□□□□ -1.3
VPS13D-211ENST00000543710 APC2O95996 2303 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 PLPP3O14495 311 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 GEMIN2O14893 280 aaKnown RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CD3DP04234 171 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 SIGIRRQ6IA17 410 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PAQR6Q6TCH4 344 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 SAXO1Q8IYX7 474 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 ZFP62Q8NB50 900 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 ZNRF4Q8WWF5 429 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 RTN4IP1Q8WWV3 396 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 LHX4Q969G2 390 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 SEC22AQ96IW7 307 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PECRQ9BY49 303 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 GSX1Q9H4S2 264 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 OR6C3Q9NZP0 311 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PITPNC1Q9UKF7 332 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CTSVO60911 334 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CTGFP29279 349 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TCTAP57738 103 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 DCAF10Q5QP82 559 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 UBE3DQ7Z6J8 389 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TMEM179BQ7Z7N9 219 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 MUC20Q8N307 709 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TMEM158Q8WZ71 300 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 C4orf45Q96LM5 186 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TSPAN32Q96QS1 320 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 ADAT1Q9BUB4 502 aaKnown RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 WDR54Q9H977 334 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CGGBP1Q9UFW8 167 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 NEU3Q9UQ49 428 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PCDHGA9Q9Y5G4 932 aaKnown RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TRBV9A0A0B4J1U6 114 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 OR5H1A6NKK0 313 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PGGT1BP53609 377 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CLDN12P56749 244 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 LINC00303Q3SY05 128 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 SLC26A10Q8NG04 563 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 OR4A4PQ8NGN8 299 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 FAM222BQ8WU58 562 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 RPP25Q9BUL9 199 aaKnown RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PTBP3O95758 552 aaKnown RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 GPANK1O95872 356 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 B3GALT4O96024 378 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 HERVK_113P61574 105 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 OR5D18Q8NGL1 313 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 UBALD1Q8TB05 177 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 PPP1R1CQ8WVI7 109 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 KAT6AQ92794 2004 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CLEC18AA5D8T8 446 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CDS2O95674 445 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 SEC11BP0C7V7 166 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 AREGP15514 252 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 ACP1P24666 158 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 COMPP49747 757 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 OR2T2Q6IF00 324 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TMEM92Q6UXU6 159 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 ZNF511Q8NB15 262 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 CLEC18CQ8NCF0 446 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 IL22RA2Q969J5 263 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 RAB33BQ9H082 229 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TMEM38BQ9NVV0 291 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TECRQ9NZ01 308 aaKnown RBP6.94□□□□□ -1.3
VPS13D-211ENST00000543710 TBC1D29Q9UFV1 150 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 MIOXQ9UGB7 285 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 V9GYH0 126 aa6.94□□□□□ -1.3
VPS13D-211ENST00000543710 C9orf172C9J069 976 aa6.93□□□□□ -1.3
VPS13D-211ENST00000543710 F2RL2O00254 374 aa6.93□□□□□ -1.3
VPS13D-211ENST00000543710 SEMA7AO75326 666 aa6.93□□□□□ -1.3
VPS13D-211ENST00000543710 SMIM17P0DL12 118 aa6.93□□□□□ -1.3
VPS13D-211ENST00000543710 PCSK6P29122 969 aa6.93□□□□□ -1.3
VPS13D-211ENST00000543710 SLC6A1P30531 599 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms