RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FCN1O00602 326 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 GNG7O60262 68 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 FABP2P12104 132 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 HTR1DP28221 377 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 KIR2DS2P43631 304 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 SLC25A1P53007 311 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 ELOBQ15370 118 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 C9orf62Q8N4C0 152 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 KTI12Q96EK9 354 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-208ENST00000538570 MYOZ1Q9NP98 299 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-208ENST00000538570 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-208ENST00000538570 RASL12Q9NYN1 266 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 STARD10Q9Y365 291 aa8.89□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF737O75373 536 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 ANKRD34CP0C6C1 535 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 PPP2CBP62714 309 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 TMEM251Q8N6I4 163 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 OR2Z1Q8NG97 314 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 ALKBH7Q9BT30 221 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 F5H697 171 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 NEURL1O76050 574 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 NUDT3O95989 172 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 HIST1H1DP16402 221 aaKnown RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 SLC37A1P57057 533 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MRM1Q6IN84 353 aaKnown RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 NHLRC1Q6VVB1 395 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 BPIFA4PQ86YQ2 179 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 OR5D13Q8NGL4 314 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 SPACA9Q96E40 222 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 WDFY2Q96P53 400 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF391Q9UJN7 358 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 PRRC2BQ5JSZ5 2229 aaKnown RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MAP1LC3B2A6NCE7 125 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 LINC01387J3KSC0 135 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MDH2P40926 338 aaKnown RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 RIPPLY3P57055 190 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 SLC36A1Q7Z2H8 476 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MRGPREQ86SM8 312 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MARVELD1Q9BSK0 173 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MAP1LC3BQ9GZQ8 125 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 TRPM3Q9HCF6 1732 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 C3orf85A0A1B0GTC6 90 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 HMSDA8MTL9 139 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 SPINK4O60575 86 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 FCGR3BO75015 233 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 PTP4A3O75365 173 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 NGFP01138 241 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 CD96P40200 585 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 LPAR6P43657 344 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 CEBPDP49716 269 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 GFERP55789 205 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 TRAT1Q6PIZ9 186 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 SEZ6L2Q6UXD5 910 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 RTN4RL1Q86UN2 441 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 ARHGAP5-AS1Q96IT6 56 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MRGPRX1Q96LB2 322 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 PHF7Q9BWX1 381 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 HSPB8Q9UJY1 196 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 TGIF2-C20orf24A0A0A6YYL0 155 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 SHISA7A6NL88 538 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 IGLV3-25P01717 112 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 GP1BAP07359 652 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 GALP22466 123 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 RPL34P49207 117 aaKnown RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 ARF6P62330 175 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 OR5C1Q8NGR4 320 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 TEX101Q9BY14 249 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 FOXQ1Q9C009 403 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 GAL3ST2Q9H3Q3 398 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 A0A1W2PPC4 97 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 C9orf170A2RU37 121 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 HOXB1P14653 301 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-208ENST00000538570 SLC6A1P30531 599 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MEOX1P50221 254 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 NUDT11Q96G61 164 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 C4AP0C0L4 1744 aa8.88□□□□□ -0.99
COL4A6-208ENST00000538570 MKRN2OSH3BPM6 223 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 OPN1MWP04001 364 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 OPN1MW2P0DN77 364 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 OPN1MW3P0DN78 364 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 TCTAP57738 103 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 HLA-DRB3P79483 266 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 KISS1Q15726 138 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 WDR38Q5JTN6 314 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 OR52L2PQ8NGH6 319 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 CHAC2Q8WUX2 184 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 LPAR3Q9UBY5 353 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF716A6NP11 495 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 IGHA1P01876 353 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 IGHA2P01877 340 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 SDHBP21912 280 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 UQCRFS1P47985 274 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 RHOBP62745 196 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 RAB32Q13637 225 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 IL13RA2Q14627 380 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 CXorf67Q86X51 503 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-208ENST00000538570 MUC20Q8N307 709 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-208ENST00000538570 CBLN4Q9NTU7 201 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 KCNE3Q9Y6H6 103 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms