RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 MMACHCQ9Y4U1 282 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 ANKRD12Q6UB98 2062 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 LOC102724200A0A096LPH7 203 aaPredicted RBP2.23□□□□□ -2.05
PRKDC-205ENST00000535375 ISPDA4D126 451 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 RNASEK-C17orf49H0YIS7 233 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 OR7C2O60412 319 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 SCO1O75880 301 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 OR4Q2P0C623 313 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 SPAM1P38567 509 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 DSTNP60981 165 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 VSNL1P62760 191 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 ADIGQ0VDE8 80 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 TRDNQ13061 729 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 STX3Q13277 289 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 DMC1Q14565 340 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 PMVKQ15126 192 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 USF2Q15853 346 aaPredicted RBP2.23□□□□□ -2.05
PRKDC-205ENST00000535375 ZBTB6Q15916 424 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 CLLU1OSQ5K130 101 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 FAM104BQ5XKR9 115 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 TCAIMQ8N3R3 496 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 ZFP3Q96NJ6 502 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 METTL26Q96S19 204 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 COPS4Q9BT78 406 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 GOLPH3Q9H4A6 298 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 NLE1Q9NVX2 485 aaPredicted RBP2.23□□□□□ -2.05
PRKDC-205ENST00000535375 ENPP4Q9Y6X5 453 aa2.23□□□□□ -2.05
PRKDC-205ENST00000535375 GOLGA8QA0A0J9YX86 632 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 LINC00854A0A1B0GVQ3 168 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 OR2AT4A6NND4 320 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 IQCF5A8MTL0 148 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 A8MWL6 223 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 CDIPTO14735 213 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 TCAPO15273 167 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 FADS2O95864 444 aaKnown RBP2.22□□□□□ -2.05
PRKDC-205ENST00000535375 MAS1P04201 325 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 HLA-GP17693 338 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 IL12BP29460 328 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 RANBP1P43487 201 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 CD151P48509 253 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 TSPAN5P62079 268 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 RBX1P62877 108 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 XRCC4Q13426 336 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 MAPRE2Q15555 327 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 CLEC12AQ5QGZ9 265 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 ZNF678Q5SXM1 525 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 KCTD16Q68DU8 428 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 PRNTQ86SH4 94 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 STK40Q8N2I9 435 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 ZNF555Q8NEP9 628 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 FAM57AQ8TBR7 257 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 KLF14Q8TD94 323 aaPredicted RBP2.22□□□□□ -2.05
PRKDC-205ENST00000535375 ORAOV1Q8WV07 137 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 CCDC124Q96CT7 223 aaKnown RBP2.22□□□□□ -2.05
PRKDC-205ENST00000535375 VAT1Q99536 393 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 MS4A8Q9BY19 250 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 TBL1XR1Q9BZK7 514 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 ASB7Q9H672 318 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 LINC00574Q9H8X3 128 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 TREM1Q9NP99 234 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 OR2S2Q9NQN1 319 aa2.22□□□□□ -2.05
PRKDC-205ENST00000535375 KLF13Q9Y2Y9 288 aaPredicted RBP2.22□□□□□ -2.05
PRKDC-205ENST00000535375 C2orf16Q68DN1 1984 aa2.21□□□□□ -2.05
PRKDC-205ENST00000535375 FBN1P35555 2871 aaKnown RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 A0A0G2JMP0 313 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 A0A0X1KG70 313 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 A0A1B0GXF2 115 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 SHOX2O60902 331 aaPredicted RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 HTR2BP41595 481 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 SLC18A1P54219 525 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 RPL10AP62906 217 aaKnown RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 MEF2CQ06413 473 aaPredicted RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 STX4Q12846 297 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 ZNF404Q494X3 552 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 PRSS54Q6PEW0 395 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 SSX6Q7RTT6 188 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 LRRC8AQ8IWT6 810 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 C17orf78Q8N4C9 275 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 CCNYL1Q8N7R7 359 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 ZCCHC13Q8WW36 166 aaKnown RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 OR5P2Q8WZ92 322 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 SMIM8Q96KF7 97 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 ZNF396Q96N95 335 aaPredicted RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 BIRC8Q96P09 236 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 QKIQ96PU8 341 aaKnown RBP eCLIP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 MARVELD1Q9BSK0 173 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 BEX2Q9BXY8 128 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 ANGPTL4Q9BY76 406 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 NXF2Q9GZY0 626 aaKnown RBP2.21□□□□□ -2.06
PRKDC-205ENST00000535375 CFAP45Q9UL16 551 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 PIK3R4Q99570 1358 aa2.21□□□□□ -2.06
PRKDC-205ENST00000535375 SCN1AP35498 2009 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 ELP1O95163 1332 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 FFAR1O14842 300 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 CD28P10747 220 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 TEAD1P28347 426 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 GTF2H1P32780 548 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 MPIP34949 423 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms