RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 RPUSD3Q6P087 351 aaKnown RBP5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 BAP18Q8IXM2 172 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 HSD17B10Q99714 261 aaKnown RBP5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 GDF15Q99988 308 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CTDSP1Q9GZU7 261 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 OR2D2Q9H210 308 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 HEXA-AS1Q9H8Q6 139 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 ZNF230Q9UIE0 474 aaPredicted RBP5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 TMEFF2Q9UIK5 374 aaPredicted RBP5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 LAMA4Q16363 1823 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 UMAD1C9J7I0 102 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 HRKO00198 91 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 PLPP2O43688 288 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 LGALS7P47929 136 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 FOXL2P58012 376 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 TGIF1Q15583 401 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 C1orf185Q5T7R7 199 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 ATG4DQ86TL0 474 aaPredicted RBP5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 OR5AP2Q8NGF4 316 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 PPP1R1CQ8WVI7 109 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 RASL11BQ9BPW5 248 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 SMIM7Q9BQ49 75 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 PLSCR3Q9NRY6 295 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 RNF7Q9UBF6 113 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 KCNMB2Q9Y691 235 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 PPP1R2P9O14990 202 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 LANCL1O43813 399 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 ONECUT2O95948 504 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 PDGFAP04085 211 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CST2P09228 141 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CD37P11049 281 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 LIFP15018 202 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CD96P40200 585 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 LINC00303Q3SY05 128 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CLEC2AQ6UVW9 174 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 Q6ZNX1 250 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 GMPPAQ96IJ6 420 aaPredicted RBP5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 TTTY12Q9BZ98 90 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 C1RLQ9NZP8 487 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CABIN1Q9Y6J0 2220 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 SHROOM3Q8TF72 1996 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 TMEM272A0A1B0GTI8 110 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 HMGA2P52926 109 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 STARD6P59095 220 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 MRPS11P82912 194 aaKnown RBP5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 GGTLC2Q14390 218 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 TNXAQ16473 311 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 CD300LDQ6UXZ3 194 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 ADTRPQ96IZ2 230 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 UCN2Q96RP3 112 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 ZNF385DQ9H6B1 395 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 UQCC1Q9NVA1 299 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 COA4Q9NYJ1 87 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 CLN8Q9UBY8 286 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 DUS4LO95620 317 aaKnown RBP5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 PNPP00491 289 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 ZNF17P17021 662 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 GPR6P46095 362 aaPredicted RBP5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 CLDN20P56880 219 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 ETFDHQ16134 617 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 ZNF260Q3ZCT1 412 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 INO80CQ6PI98 192 aaPredicted RBP5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 ZNF788Q6ZQV5 615 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 SSX8Q7RTT4 187 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 RXFP4Q8TDU9 374 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 BCL2L2Q92843 193 aaPredicted RBP5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 MS4A7Q9GZW8 240 aaPredicted RBP5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 SLC25A32Q9H2D1 315 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 ZNF629Q9UEG4 869 aaPredicted RBP5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 TMED3Q9Y3Q3 217 aa5.65□□□□□ -1.51
UBQLN1-206ENST00000533705 A0A1W2PPV9 198 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 CDC42EP2O14613 210 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 CDIPTO14735 213 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 S100A8P05109 93 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 PGA3P0DJD8 388 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 PCMT1P22061 227 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 C21orf58P58505 322 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 MESP2Q0VG99 397 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 KRTCAP3Q53RY4 240 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 FBXW9Q5XUX1 488 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 ADAM5Q6NVV9 412 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 OR2M3Q8NG83 312 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 OR8B12Q8NGG6 310 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 VSTM2AQ8TAG5 236 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 ZCCHC14Q8WYQ9 949 aaKnown RBP5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 C10orf90Q96M02 699 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 PCGF1Q9BSM1 259 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 OR51I2Q9H344 312 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 GPR35Q9HC97 309 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 EXOGQ9Y2C4 368 aaKnown RBP5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 NPTNQ9Y639 398 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 DNPH1O43598 174 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 SOX15O60248 233 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 OR2J3O76001 311 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 FUCA1P04066 466 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 WNT1P04628 370 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 ANKRD34CP0C6C1 535 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 FGF9P31371 208 aaPredicted RBP5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 NAAAQ02083 359 aa5.64□□□□□ -1.51
UBQLN1-206ENST00000533705 FAHD2BQ6P2I3 314 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms