RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 FAM90A1Q86YD7 464 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 CDH26Q8IXH8 852 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 SAXO1Q8IYX7 474 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 ZSCAN4Q8NAM6 433 aaPredicted RBP11.49□□□□□ -0.57
CD44-224ENST00000526669 PXT1Q8NFP0 134 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 OR6M1Q8NGM8 313 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 RAB2BQ8WUD1 216 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 FAM46BQ96A09 425 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 C12orf43Q96C57 262 aaKnown RBP11.49□□□□□ -0.57
CD44-224ENST00000526669 C1orf147Q96MC9 270 aaPredicted RBP11.49□□□□□ -0.57
CD44-224ENST00000526669 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
CD44-224ENST00000526669 DCSTAMPQ9H295 470 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 BANF2Q9H503 90 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 NLKQ9UBE8 527 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 DAPK2Q9UIK4 370 aa11.49□□□□□ -0.57
CD44-224ENST00000526669 ZNF469Q96JG9 3925 aaPredicted RBP11.49□□□□□ -0.57
CD44-224ENST00000526669 ACANP16112 2415 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 TEX15Q9BXT5 2789 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 A0A1B0GW55 424 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 IFITM5A6NNB3 132 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 NOTOA8MTQ0 251 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 VWC2LB2RUY7 222 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 H3BMQ9 156 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 SLC22A1O15245 554 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 NOS1APO75052 506 aaPredicted RBP11.48□□□□□ -0.57
CD44-224ENST00000526669 CRTAPO75718 401 aaPredicted RBP11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4L2P0CJ85 424 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4L3P0CJ86 424 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4L4P0CJ87 422 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4L5P0CJ88 424 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4L6P0CJ89 424 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4L7P0CJ90 424 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 MDH2P40926 338 aaKnown RBP11.48□□□□□ -0.57
CD44-224ENST00000526669 NR4A2P43354 598 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 GABRA2P47869 451 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 TMBIM6P55061 237 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DSCR9P59020 149 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 PLA2G7Q13093 441 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 SMIM21Q3B7S5 101 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 IDNKQ5T6J7 187 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 SHEQ5VZ18 495 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 FAM166AQ6J272 317 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4L9Q6RFH8 374 aaPredicted RBP11.48□□□□□ -0.57
CD44-224ENST00000526669 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 USP43Q70EL4 1123 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 FAM58AQ8N1B3 248 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 MAPK1IP1LQ8NDC0 245 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 OR51D1Q8NGF3 324 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 SLC25A28Q96A46 364 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 GAL3ST1Q99999 423 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 TMEM165Q9HC07 324 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 HES4Q9HCC6 221 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 DUX4Q9UBX2 424 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 STEAP1Q9UHE8 339 aa11.48□□□□□ -0.57
CD44-224ENST00000526669 TRAV38-1A0A0B4J264 116 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 RFPL4AA6NLU0 287 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 RNF223E7ERA6 249 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 RFPL4AL1F8VTS6 287 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 AIPO00170 330 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 NDUFS8O00217 210 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 MPIG6BO95866 241 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 IL1AP01583 271 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 CSTBP04080 98 aaKnown RBP11.47□□□□□ -0.57
CD44-224ENST00000526669 CD37P11049 281 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 PSG2P11465 335 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 SELLP14151 372 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 SNRPBP14678 240 aaKnown RBP11.47□□□□□ -0.57
CD44-224ENST00000526669 PSMD7P51665 324 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 DGUOKQ16854 277 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 MICBQ29980 383 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 PIGYQ3MUY2 71 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 ZNF404Q494X3 552 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 TEX36Q5VZQ5 186 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 PRSS57Q6UWY2 283 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 LRRC28Q86X40 367 aaPredicted RBP11.47□□□□□ -0.57
CD44-224ENST00000526669 Q8IYB0 196 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 TMEM104Q8NE00 496 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 TBC1D15Q8TC07 691 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 FAM3DQ96BQ1 224 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 CCL13Q99616 98 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 HMG20AQ9NP66 347 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
CD44-224ENST00000526669 IGKV1D-17A0A075B6S4 117 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 TMEM272A0A1B0GTI8 110 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 OR2AT4A6NND4 320 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 ADAM20O43506 726 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 BPNT1O95861 308 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 PAHP00439 452 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 ACAA1P09110 424 aaPredicted RBP11.46□□□□□ -0.57
CD44-224ENST00000526669 VSIG8P0DPA2 414 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 ARSBP15848 533 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 MUC1P15941 1255 aaPredicted RBP11.46□□□□□ -0.57
CD44-224ENST00000526669 SLC25A16P16260 332 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 FGF12P61328 243 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 SCN1BQ07699 218 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms