RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CHRNA10Q9GZZ6 450 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 OR51E2Q9H255 320 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 ACKR4Q9NPB9 350 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 SPANXB1Q9NS25 103 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 ARL15Q9NXU5 204 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF222Q9UK12 451 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 SDK2Q58EX2 2172 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 IGHV1OR21-1A0A087WYE8 117 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 A0A0U1RRA0 63 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 A0A1W2PPV9 198 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 LILRA5A6NI73 299 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 E5RGE8 158 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 DEGS1O15121 323 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 LYRM1O43325 122 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 PRAF2O60831 178 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 CLDN7O95471 211 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 OR5G3P0C626 314 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 MGMTP16455 207 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 HTR1DP28221 377 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 CDKN2BP42772 138 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 KIR2DL2P43627 348 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 GPR6P46095 362 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 DNASE1L1P49184 302 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 PAX9P55771 341 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 RAB10P61026 200 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 UFM1P61960 85 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 PLCXD2Q0VAA5 305 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 IL10RAQ13651 578 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 OR1Q1Q15612 314 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 GABRA6Q16445 453 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 SRSF7Q16629 238 aaKnown RBP eCLIP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 DCAF12Q5T6F0 453 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 AGTRAPQ6RW13 159 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 HEPN1Q6WQI6 88 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 WDR53Q7Z5U6 358 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 IFNEQ86WN2 208 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 PLXDC1Q8IUK5 500 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 DND1Q8IYX4 353 aaKnown RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 LGI4Q8N135 537 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF614Q8N883 585 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 LRRC57Q8N9N7 239 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF439Q8NDP4 499 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 OR4K1Q8NGD4 311 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 OR1L4Q8NGR5 311 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 OR2Y1Q8NGV0 311 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 KIR2DL5BQ8NHK3 375 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 CCL4L1Q8NHW4 92 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF519Q8TB69 540 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF418Q8TF45 676 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 EEF1AKMT1Q8WVE0 214 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 SPRYD4Q8WW59 207 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 SCAMP4Q969E2 229 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 DNAJC30Q96LL9 226 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF75AQ96N20 296 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 NSUN5Q96P11 429 aaKnown RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 TRIB3Q96RU7 358 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 CLCC1Q96S66 551 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 MGLLQ99685 303 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 HIST1H2BLQ99880 126 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 MCRIP2Q9BUT9 160 aaKnown RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 AMBRA1Q9C0C7 1298 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 SELENOIQ9C0D9 397 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 LAT2Q9GZY6 243 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ARL6Q9H0F7 186 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 NXF5Q9H1B4 397 aaKnown RBP6.59□□□□□ -1.35
HDAC3-216ENST00000523088 OR51J1Q9H342 316 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 RBKSQ9H477 322 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ZBTB26Q9HCK0 441 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 GALNT9Q9HCQ5 603 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 UQCC1Q9NVA1 299 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 TMEM45AQ9NWC5 275 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 PIPOXQ9P0Z9 390 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 SPTA1P02549 2419 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 MGAQ8IWI9 3026 aa6.59□□□□□ -1.35
HDAC3-216ENST00000523088 ATMQ13315 3056 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 PRAMEF33A0A0G2JMD5 474 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 IGHV5-10-1A0A0J9YXX1 117 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 A0A1W2PNU3 283 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-216ENST00000523088 GXYLT2A0PJZ3 443 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 C3orf70A6NLC5 250 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A5PA8MXJ8 464 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 J3QR89 54 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 APOC4-APOC2K7ER74 178 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 MFNGO00587 321 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 PRAMEF10O60809 474 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 PAGE4O60829 102 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 C1QL1O75973 258 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 NCR1O76036 304 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 SCGNO76038 276 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 SLC25A14O95258 325 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-216ENST00000523088 APOC2P02655 101 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 THBDP07204 575 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 ANKRD34CP0C6C1 535 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A15PP0C7V4 464 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A14PP0C7W9 464 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 PRSS56P0CW18 603 aa6.58□□□□□ -1.36
HDAC3-216ENST00000523088 COX7A2P14406 83 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms