RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 RSG1Q9BU20 258 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 EMC6Q9BV81 110 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 TMED3Q9Y3Q3 217 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 LOC400499M0QZD8 3231 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 CXCL11O14625 94 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 SH2D1BO14796 132 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 IFNA21P01568 189 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 GSTP1P09211 210 aaKnown RBP6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 OR5G3P0C626 314 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 CEACAM6P40199 344 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 PIGPP57054 158 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 KRTDAPP60985 99 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 SP3Q02447 781 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 CXorf66Q5JRM2 361 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 C1orf194Q5T5A4 169 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 SLC24A5Q71RS6 500 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 DCXRQ7Z4W1 244 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 WDFY1Q8IWB7 410 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 OR51T1Q8NGJ9 327 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 LYPD6BQ8NI32 183 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 TMEM18Q96B42 140 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 CERS4Q9HA82 394 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 C14orf166Q9Y224 244 aaKnown RBP6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 RNF115Q9Y4L5 304 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 RNF114Q9Y508 228 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 LTBP4Q8N2S1 1624 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 CEP290O15078 2479 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 C5orf63A6NC05 138 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 PPP5D1E7EU14 171 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 TAAR5O14804 337 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 RAB29O14966 203 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 OR2J2O76002 312 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 VAMP5O95183 116 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 KAT7O95251 611 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 MELTFP08582 738 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 METTL15P1P0C7V9 234 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 PET100P0DJ07 73 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 BLVRBP30043 206 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 PPM1FP49593 454 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 RAB38P57729 211 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 GGTLC2Q14390 218 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ASPHD1Q5U4P2 390 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 KMT5CQ86Y97 462 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 SULF2Q8IWU5 870 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF321PQ8N8H1 164 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 OR51E1Q8TCB6 317 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 RPS4Y2Q8TD47 263 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ST6GALNAC6Q969X2 333 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 NUS1Q96E22 293 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 RTN4RQ9BZR6 473 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 IGKV1D-42A0A075B6H8 117 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 NSG1A0A0A6YYJ2 146 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF816-ZNF321PA0A0X1KG74 233 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 IGSF23A1L1A6 192 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 IGLON5A6NGN9 336 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 C3orf80F5H4A9 247 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 K7N7A8 449 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 HAX1O00165 279 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 HCRTR1O43613 425 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 CDC14BO60729 498 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 LILRA1O75019 489 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 IL6RP08887 468 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 TMEM225BP0DP42 221 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 IL11P20809 199 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF93P35789 620 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 TGFBR3Q03167 851 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 AGBL4Q5VU57 503 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 OTOSQ8NHW6 89 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 DAZLQ92904 295 aaKnown RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 LIN37Q96GY3 246 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 LMLNQ96KR4 655 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 HSPB9Q9BQS6 159 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 MYOZ1Q9NP98 299 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 LSM7Q9UK45 103 aaKnown RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 MEMO1Q9Y316 297 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 RBM7Q9Y580 266 aaKnown RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 TRBV11-1A0A0K0K1C0 115 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 EML2O95834 649 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 LINC00614P0C842 121 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 CXCR1P25024 350 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 RPS12P25398 132 aaKnown RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 CST5P28325 142 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 GPR3P46089 330 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 P2RY1P47900 373 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF41P51814 821 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 IL15RAQ13261 267 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 MLC1Q15049 377 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 TAF9Q16594 264 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ERN2Q76MJ5 926 aaKnown RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 NUFIP2Q7Z417 695 aaKnown RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 MCEMP1Q8IX19 187 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 C12orf76Q8N812 135 aaPredicted RBP6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 OR4C5Q8NGB2 326 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF461Q8TAF7 563 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 METTL21AQ8WXB1 218 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 NAT6Q93015 286 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 SLC46A2Q9BY10 475 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 WWTR1Q9GZV5 400 aa6.36□□□□□ -1.39
LIMCH1-207ENST00000508466 MBNL1Q9NR56 388 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms