RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 OR56A5P0C7T3 313 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 RPL14P50914 215 aaKnown RBP2.59□□□□□ -2
TRAPPC13-208ENST00000505553 KRTAP10-8P60410 259 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 LOXL1Q08397 574 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-208ENST00000505553 DMC1Q14565 340 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 LTBP1Q14766 1721 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 SLC25A35Q3KQZ1 300 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 YIF1BQ5BJH7 314 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 TSPO2Q5TGU0 170 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 PGAM4Q8N0Y7 254 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 OR4K2Q8NGD2 314 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 OR4K5Q8NGD3 323 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 PRG4Q92954 1404 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-208ENST00000505553 DDIT4LQ96D03 193 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 WDR34Q96EX3 536 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 ZNF799Q96GE5 643 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 RHOFQ9HBH0 211 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 SPANXB1Q9NS25 103 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-208ENST00000505553 PRR34Q9NV39 138 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 LRRC42Q9Y546 428 aa2.59□□□□□ -2
TRAPPC13-208ENST00000505553 NRCAMQ92823 1304 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 ADAMTSL3P82987 1691 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 GPATCH8Q9UKJ3 1502 aaKnown RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 PCF11O94913 1555 aaKnown RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 A0A096LNJ9 63 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 IGKV6D-21A0A0A0MT36 114 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 IGHV7-4-1A0A0J9YVY3 117 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TMEM223A0PJW6 202 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 RBFOX3A6NFN3 312 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 GOLGA8KD6RF30 607 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TMX2-CTNND1H3BSU7 103 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 GOLGA8MH3BSY2 632 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 I3L4J1 428 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 J3QLI3 93 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 PHYHO14832 338 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 PLIN3O60664 434 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 ENTPD6O75354 484 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 SCO1O75880 301 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 MPZL1O95297 269 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 HLA-AP01891 365 aaKnown RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 HLA-DQA1P01909 254 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 OCM2P0CE71 109 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 F8A1P23610 371 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 IL3RAP26951 378 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TSPOP30536 169 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 BLVRAP53004 296 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 CCL23P55773 120 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 DLX6P56179 175 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 MAGOHP61326 146 aaKnown RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 GRB2P62993 217 aaKnown RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 HBG1P69891 147 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 HBG2P69892 147 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 BNIP2Q12982 314 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 SHHQ15465 462 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 CDKL4Q5MAI5 379 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 FAM45BPQ6NSW5 357 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 FAM183BPQ6ZVS7 135 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 LINC01551Q86U37 167 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 RIMKLAQ8IXN7 391 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 MKXQ8IYA7 352 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TMEM256Q8N2U0 113 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 SLC26A10Q8NG04 563 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 OR5L1Q8NGL2 311 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 ORAOV1Q8WV07 137 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 NARS2Q96I59 477 aaKnown RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 ZNF414Q96IQ9 312 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 NUDT9Q9BW91 350 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 SUCNR1Q9BXA5 334 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 SLC17A9Q9BYT1 436 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TBL1XR1Q9BZK7 514 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TSGA10Q9BZW7 698 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 DHX35Q9H5Z1 703 aaKnown RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 ENOPH1Q9UHY7 261 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 ZNF222Q9UK12 451 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 PRG3Q9Y2Y8 225 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-208ENST00000505553 GRIN2AQ12879 1464 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TEX14Q8IWB6 1497 aa2.58□□□□□ -2
TRAPPC13-208ENST00000505553 TOP2AP11388 1531 aaKnown RBP2.57□□□□□ -2
TRAPPC13-208ENST00000505553 IGHV3-72A0A0B4J1Y9 119 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 CCL15-CCL14A0A0B4J2E2 113 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 A0A0G2JMP0 313 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 A0A0X1KG70 313 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 H0YJW9 148 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 UPK1AO00322 258 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 CYTH3O43739 400 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 ADAP1O75689 374 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 SNRPAP09012 282 aaKnown RBP2.57□□□□□ -2
TRAPPC13-208ENST00000505553 SLC2A1P11166 492 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 HIST1H1CP16403 213 aaKnown RBP2.57□□□□□ -2
TRAPPC13-208ENST00000505553 ATF1P18846 271 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 CDC34P49427 236 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-208ENST00000505553 CCL15Q16663 113 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 SLC36A2Q495M3 483 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 ACTBL2Q562R1 376 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 AP1ARQ63HQ0 302 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 NTM-AS1Q6ZSK4 140 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 FAM231DQ6ZW35 169 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 SH2D6Q7Z4S9 175 aa2.57□□□□□ -2
TRAPPC13-208ENST00000505553 SLC13A5Q86YT5 568 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms