RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PDP1Q9P0J1 537 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 B4GALT7Q9UBV7 327 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 UBQLN1Q9UMX0 589 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 NEU3Q9UQ49 428 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC35A3Q9Y2D2 325 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 MMACHCQ9Y4U1 282 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 HES2Q9Y543 173 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TIMM10BQ9Y5J6 103 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PCYT1BQ9Y5K3 369 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 DOCK1Q14185 1865 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ZNF318Q5VUA4 2279 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 DENND4AQ7Z401 1863 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 A6NIZ1 184 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 PPIAL4DF5H284 164 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ZNF593O00488 134 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC17A2O00624 439 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 B4GALT5O43286 388 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ZNF208O43345 1280 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 EMC8O43402 210 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR1F1O43749 312 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SSNA1O43805 119 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 DUX1O43812 170 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR2T1O43869 369 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 FCMRO60667 390 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 DNAJB6O75190 326 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 REM1O75628 298 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 GATBO75879 557 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR2F2O95006 317 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 DUSP14O95147 198 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 UBL3O95164 117 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC2A10O95528 541 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC25A27O95847 323 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SOD1P00441 154 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ALDOBP05062 364 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 FABP3P05413 133 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 CD2P06729 351 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 STAG3L3P0CL85 134 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC25A4P12235 298 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 RAB5AP20339 215 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 TBXA2RP21731 343 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 HTR2CP28335 458 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 CD1CP29017 333 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 RPL4P36578 427 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 GLP1RP43220 463 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 XCR1P46094 333 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC11A1P49279 550 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 PPT1P50897 306 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 IDH3GP51553 393 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 WNT4P56705 351 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 AP3S2P59780 193 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 RPS20P60866 119 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 CDC42P60953 191 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 RND3P61587 244 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 RBX1P62877 108 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 IGLV3-21P80748 117 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 PJVKQ0ZLH3 352 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR2F1Q13607 317 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 HTR4Q13639 388 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 IL18Q14116 193 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 PAFAH1B3Q15102 231 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR8G1Q15617 311 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ATP6AP1LQ52LC2 224 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ARMC12Q5T9G4 340 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 FHL5Q5TD97 284 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 FBXW9Q5XUX1 488 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ZNF57Q68EA5 555 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 CLEC6AQ6EIG7 209 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR8G2PQ6IF36 304 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 DEGS2Q6QHC5 323 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ALKAL2Q6UX46 152 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 CERS6Q6ZMG9 384 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 STAC2Q6ZMT1 411 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SMIM15Q7Z3B0 74 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SH2D6Q7Z4S9 175 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 BIVMQ86UB2 503 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 CBLN2Q8IUK8 224 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 C9orf40Q8IXQ3 194 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 LRRC75A-AS1Q8N1F1 130 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 BPIFB2Q8N4F0 458 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 KCNRGQ8N5I3 272 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ZNF525Q8N782 197 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 FAM86B1Q8N7N1 296 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ARIH2OSQ8N7S6 290 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 TMEM104Q8NE00 496 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 SDR9C7Q8NEX9 313 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR2L3Q8NG85 312 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR4K2Q8NGD2 314 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR8J2Q8NGG1 315 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR2D3Q8NGH3 330 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR1J4Q8NGS1 313 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR13D1Q8NGV5 346 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 OR2G2Q8NGZ5 317 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 JOSD2Q8TAC2 188 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 RNASEH2CQ8TDP1 164 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 HAVCR2Q8TDQ0 301 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 PIGCQ92535 297 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 TNFRSF14Q92956 283 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 ARL11Q969Q4 196 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 RASD2Q96D21 266 aa2.86□□□□□ -1.95
ECHDC1-217ENST00000488087 C12orf66Q96MD2 445 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 826.9 ms