RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 KRT8P05787 483 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 CHRM2P08172 466 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 ZNF728P0DKX0 622 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 DYNC1I2Q13409 638 aaKnown RBP17.01■□□□□ 0.31
COL9A3-207ENST00000467819 LDLRAD2Q5SZI1 272 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 C12orf73Q69YU5 71 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 GID4Q8IVV7 300 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 RPS4Y2Q8TD47 263 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 SLC7A6OSQ96CW6 309 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-207ENST00000467819 CEP19Q96LK0 163 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 SERTAD4Q9NUC0 356 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 IGKV1-27A0A075B6S5 117 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 ZNF737O75373 536 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 DNAJC8O75937 253 aaPredicted RBP17■□□□□ 0.31
COL9A3-207ENST00000467819 APOL3O95236 402 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 CD28P10747 220 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 CCL1P22362 96 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 EFNB1P98172 346 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 EDDM3AQ14507 147 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 CNN3Q15417 329 aaKnown RBP17■□□□□ 0.31
COL9A3-207ENST00000467819 UBE2V2Q15819 145 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 ZNF626Q68DY1 528 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 MALSU1Q96EH3 234 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 MTCH1Q9NZJ7 389 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 KIAA2026Q5HYC2 2103 aa17■□□□□ 0.31
COL9A3-207ENST00000467819 A6NDX4 124 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 SYT7O43581 403 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 RBP4P02753 201 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 IGHV1-8P0DP01 117 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 KPRPQ5T749 579 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-207ENST00000467819 TCF23Q7RTU1 214 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 CATSPERDQ86XM0 798 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 OR8H2Q8N162 312 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 ZNF714Q96N38 554 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 OR5M11Q96RB7 305 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 PITPNC1Q9UKF7 332 aa16.99■□□□□ 0.31
COL9A3-207ENST00000467819 G3V2T6 193 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 JUNBP17275 347 aaPredicted RBP16.98■□□□□ 0.31
COL9A3-207ENST00000467819 ARSJQ5FYB0 599 aaPredicted RBP16.98■□□□□ 0.31
COL9A3-207ENST00000467819 SLC25A26Q70HW3 274 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 Q8N2B8 174 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 TPRX1Q8N7U7 411 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 OR11H6Q8NGC7 330 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 EMG1Q92979 244 aaKnown RBP16.98■□□□□ 0.31
COL9A3-207ENST00000467819 SNX22Q96L94 193 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 CDCA4Q9BXL8 241 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 PRSS22Q9GZN4 317 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 MMP28Q9H239 520 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 IL36RNQ9UBH0 155 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 HILPDAQ9Y5L2 63 aa16.98■□□□□ 0.31
COL9A3-207ENST00000467819 A0A1W2PQL4 384 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-207ENST00000467819 TMEM82A0PJX8 343 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 METTL15A6NJ78 407 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 F2RL2O00254 374 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 PEX14O75381 377 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 GATBO75879 557 aaKnown RBP16.97■□□□□ 0.31
COL9A3-207ENST00000467819 FUT6P51993 359 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 OR12D2P58182 307 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 ACTA2P62736 377 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 ACTG2P63267 376 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 ACTC1P68032 377 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 ACTA1P68133 377 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 ATP6AP1Q15904 470 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 KDM4DQ6B0I6 523 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 EGFL6Q8IUX8 553 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 OR10H4Q8NGA5 316 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 OR4S1Q8NGB4 309 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 R3HDM4Q96D70 268 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 BORCS8Q96FH0 119 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 ADI1Q9BV57 179 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 CHST6Q9GZX3 395 aa16.97■□□□□ 0.31
COL9A3-207ENST00000467819 WARS2Q9UGM6 360 aaKnown RBP16.97■□□□□ 0.31
COL9A3-207ENST00000467819 HAND1O96004 215 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 IGHA1P01876 353 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 GABRR1P24046 479 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 MEF2CQ06413 473 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-207ENST00000467819 SLC34A1Q06495 639 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 FBLN7Q53RD9 439 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 OXLD1Q5BKU9 147 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 Q6ZPA2 131 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 Q6ZS46 218 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 ZNF676Q8N7Q3 588 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 NDNFQ8TB73 568 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 CITED2Q99967 270 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-207ENST00000467819 CHST5Q9GZS9 411 aa16.96■□□□□ 0.31
COL9A3-207ENST00000467819 LOC107986453A0A1B0GWG9 222 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 hADV38S2A0JD32 116 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 OR2T7P0C7T2 308 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 HTR1FP30939 366 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 SNU13P55769 128 aaKnown RBP16.95■□□□□ 0.3
COL9A3-207ENST00000467819 EMX1Q04741 257 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-207ENST00000467819 GRK1Q15835 563 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 TMEM95Q3KNT9 176 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 AMIGO2Q86SJ2 522 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 NDUFA11Q86Y39 141 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 ZDHHC13Q8IUH4 622 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 OR52N4Q8NGI2 321 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 CIB1Q99828 191 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 GABARAPL1Q9H0R8 117 aa16.95■□□□□ 0.3
COL9A3-207ENST00000467819 SESN1Q9Y6P5 492 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms