RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 HEPN1Q6WQI6 88 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 LIAT1Q6ZQX7 453 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 Q6ZSR3 168 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 C1QL4Q86Z23 238 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 OR2M3Q8NG83 312 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 MSI2Q96DH6 328 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 TMPRSS5Q9H3S3 457 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 B3GALT1Q9Y5Z6 326 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 MSR1P21757 451 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 CD27P26842 260 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 CCL20P78556 96 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 ABCA11PQ4W5N1 156 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 PLXDC1Q8IUK5 500 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 C20orf196Q8IYI0 205 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 OR5L1Q8NGL2 311 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 WDR77Q9BQA1 342 aaPredicted RBP11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 PBDC1Q9BVG4 233 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 TGIF2Q9GZN2 237 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 METTL7AQ9H8H3 244 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 GPR173Q9NS66 373 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 NECAP2Q9NVZ3 263 aa11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDZRN3-205ENST00000466780 NSG1A0A0A6YYJ2 146 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 A0A1B0GW64 132 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 IFITM10A6NMD0 228 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 SPRY1O43609 319 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 OR2C1O95371 312 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 HEXBP07686 556 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 HTR5AP47898 357 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 IL13RA2Q14627 380 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 FAM69BQ5VUD6 431 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 FBXW12Q6X9E4 464 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 OR11L1Q8NGX0 322 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 HSF4Q9ULV5 492 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 CABIN1Q9Y6J0 2220 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 FBP1P09467 338 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 OTX1P32242 354 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 RAB1AP62820 205 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 BRICD5Q6PL45 260 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 LRRC18Q8N456 261 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 GJC3Q8NFK1 279 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 SLC22A8Q8TCC7 542 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 NABP1Q96AH0 204 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 ABHD14AQ9BUJ0 271 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 GGACTQ9BVM4 153 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 SUCNR1Q9BXA5 334 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 ZNF576Q9H609 170 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 SEMA5BQ9P283 1151 aa11.3□□□□□ -0.6
PDZRN3-205ENST00000466780 IGKV1-27A0A075B6S5 117 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 FAM221AA4D161 298 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 GPR37O15354 613 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 ST8SIA3O43173 380 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 YIF1AO95070 293 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 CHATP28329 748 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 DUSP1P28562 367 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 NOVA1P51513 510 aaKnown RBP11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 MTCP1P56278 107 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 CHAF1BQ13112 559 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 CARFQ8N187 725 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 MR1Q95460 341 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 MUCL1Q96DR8 90 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 WDR87Q6ZQQ6 2873 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 IGLV3-12A0A075B6K2 115 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 LOC102725191A0A1B0GVB3 256 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 DUX1O43812 170 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 OR2J2O76002 312 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 IFNA17P01571 189 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 HNRNPKP61978 463 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 WDSUB1Q8N9V3 476 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 SUMF2Q8NBJ7 301 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 SGK3Q96BR1 496 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 NELFAQ9H3P2 528 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 ADAMTS20P59510 1910 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 M0R135 149 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 HOXA5P20719 270 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 DTYMKP23919 212 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 PRSS12P56730 875 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 LFNGQ8NES3 379 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 OR4D5Q8NGN0 318 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 ZNF799Q96GE5 643 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 BOD1Q96IK1 185 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 TOLLIPQ9H0E2 274 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 METTL9Q9H1A3 318 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 CHRDQ9H2X0 955 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 C11orf1Q9H5F2 150 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 MMP24Q9Y5R2 645 aa11.29□□□□□ -0.6
PDZRN3-205ENST00000466780 ZNF727A8MUV8 499 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 214.2 ms