RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FAM234AQ9H0X4 552 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 DPAGT1Q9H3H5 408 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 SMPD3Q9NY59 655 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-204ENST00000462258 MTCH1Q9NZJ7 389 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 C1RLQ9NZP8 487 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 VPREB3Q9UKI3 123 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 HHLA2Q9UM44 414 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 MYRFQ9Y2G1 1151 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 MMP24Q9Y5R2 645 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 TRRAPQ9Y4A5 3859 aa8.32□□□□□ -1.08
SF3A3-204ENST00000462258 IGKV1-9A0A0C4DH69 117 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 A0A1B0GUS0 222 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 OR4C45A6NMZ5 311 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 POM121CA8CG34 1229 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 INMTO95050 263 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 NDUFA7O95182 113 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 BAG2O95816 211 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 FADS2O95864 444 aaKnown RBP8.31□□□□□ -1.08
SF3A3-204ENST00000462258 CYB5AP00167 134 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 OCM2P0CE71 109 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 OCMP0CE72 109 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-204ENST00000462258 PIPP12273 146 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-204ENST00000462258 CCL3L1P16619 93 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 ATF1P18846 271 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 PRKACBP22694 351 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 ATP1B3P54709 279 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 RAB40BQ12829 278 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 ALKBH1Q13686 389 aaKnown RBP8.31□□□□□ -1.08
SF3A3-204ENST00000462258 GALEQ14376 348 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 TAF9Q16594 264 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 HCP5Q6MZN7 132 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 GDPGP1Q6ZNW5 385 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 LHFPL2Q6ZUX7 228 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 LHFPL3Q86UP9 236 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 MKXQ8IYA7 352 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 Q8IYB0 196 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF676Q8N7Q3 588 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF555Q8NEP9 628 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 OR51A4Q8NGJ6 313 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 OR13C9Q8NGT0 318 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 RHOXF1Q8NHV9 184 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 WFDC12Q8WWY7 111 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 SPSB1Q96BD6 273 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 FGGYQ96C11 551 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 RDH12Q96NR8 316 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 ISG20L2Q9H9L3 353 aaKnown RBP8.31□□□□□ -1.08
SF3A3-204ENST00000462258 BEX1Q9HBH7 125 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 AMBNQ9NP70 447 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 RBFOX1Q9NWB1 397 aaKnown RBP8.31□□□□□ -1.08
SF3A3-204ENST00000462258 FAM118AQ9NWS6 357 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 ERVK13-1Q9NX77 482 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 IL36RNQ9UBH0 155 aa8.31□□□□□ -1.08
SF3A3-204ENST00000462258 SF3B6Q9Y3B4 125 aaKnown RBP8.31□□□□□ -1.08
SF3A3-204ENST00000462258 MGAM2Q2M2H8 2515 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 TRBV2A0A0J9YWF9 115 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 A0A1W2PPE2 198 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 A0A1W2PR64 198 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 K7N7A8 449 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF737O75373 536 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 HAND1O96004 215 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 CHRM2P08172 466 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 CCDC159P0C7I6 412 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 BCL3P20749 454 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 COX7A1P24310 79 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 SNU13P55769 128 aaKnown RBP8.3□□□□□ -1.08
SF3A3-204ENST00000462258 MTCP1P56278 107 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 EDDM3BP56851 147 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 ERVFRD-1P60508 538 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 MRPL28Q13084 256 aaKnown RBP8.3□□□□□ -1.08
SF3A3-204ENST00000462258 MIDNQ504T8 468 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-204ENST00000462258 OLFML2AQ68BL7 652 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 TMEM200BQ69YZ2 307 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 DHRS7BQ6IAN0 325 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF782Q6ZMW2 699 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-204ENST00000462258 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 GDPD3Q7L5L3 318 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 EGFL6Q8IUX8 553 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 OR8H2Q8N162 312 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 OR52I1Q8NGK6 324 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 OR5R1Q8NH85 324 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 RFT1Q96AA3 541 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 COMMD4Q9H0A8 199 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 SLITRK2Q9H156 845 aa8.3□□□□□ -1.08
SF3A3-204ENST00000462258 RPL36Q9Y3U8 105 aaKnown RBP8.3□□□□□ -1.08
SF3A3-204ENST00000462258 TMEM82A0PJX8 343 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 CLPSL1A2RUU4 121 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 TMEM212A6NML5 194 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 SPRY1O43609 319 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-204ENST00000462258 ZFPL1O95159 310 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 MT-ND2P03891 347 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 PRKACAP17612 351 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 GABRR1P24046 479 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 NPBWR2P48146 333 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 BMXP51813 675 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 EDDM3AQ14507 147 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 SMN1Q16637 294 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms