RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PPA1Q15181 289 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 C6orf183Q5T699 404 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 C1orf185Q5T7R7 199 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 C11orf88Q6PI97 169 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 NUFIP2Q7Z417 695 aaKnown RBP9.23□□□□□ -0.93
PKP4-206ENST00000452162 ADAD2Q8NCV1 583 aaKnown RBP9.23□□□□□ -0.93
PKP4-206ENST00000452162 OR5M8Q8NGP6 311 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 METTL9Q9H1A3 318 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 ADGRG4Q8IZF6 3080 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 C9orf170A2RU37 121 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 AHRRA9YTQ3 701 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 SPRY1O43609 319 aaPredicted RBP9.23□□□□□ -0.93
PKP4-206ENST00000452162 ANGPTL7O43827 346 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 HLA-HP01893 362 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 AMY2BP19961 511 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 ACSF3Q4G176 576 aaPredicted RBP9.23□□□□□ -0.93
PKP4-206ENST00000452162 SEM1Q6ZVN7 128 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 OR5H2Q8NGV7 314 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 TERB2Q8NHR7 220 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 MARCH1Q8TCQ1 289 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 TRIB1Q96RU8 372 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 IGKV1-12A0A0C4DH73 117 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 ZNF816-ZNF321PA0A0X1KG74 233 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 L7N2F9 121 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 IGKV1D-12P01611 117 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 GLI4P10075 376 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 HLA-GP17693 338 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 SNU13P55769 128 aaKnown RBP9.22□□□□□ -0.93
PKP4-206ENST00000452162 RSU1Q15404 277 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 SIGIRRQ6IA17 410 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 LPCAT3Q6P1A2 487 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 LHFPL1Q86WI0 220 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 MITD1Q8WV92 249 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 BORCS8Q96FH0 119 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 TECTBQ96PL2 329 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 CLEC4MQ9H2X3 399 aaPredicted RBP9.22□□□□□ -0.93
PKP4-206ENST00000452162 NOP16Q9Y3C1 178 aaKnown RBP9.22□□□□□ -0.93
PKP4-206ENST00000452162 TRAV14DV4A0A0A6YYC5 116 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 M0R233 179 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 HTR3BO95264 441 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 CFDP00746 253 aaPredicted RBP9.22□□□□□ -0.93
PKP4-206ENST00000452162 CD8AP01732 235 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 C4BPBP20851 252 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 GABRR1P24046 479 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 FUT6P51993 359 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 TAS2R46P59540 309 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 EXOSC2Q13868 293 aaKnown RBP9.22□□□□□ -0.93
PKP4-206ENST00000452162 C6orf201Q7Z4U5 140 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 MCEMP1Q8IX19 187 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 OR13G1Q8NGZ3 307 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 ST6GALNAC5Q9BVH7 336 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 IL36GQ9NZH8 169 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 KCNN3Q9UGI6 736 aa9.22□□□□□ -0.93
PKP4-206ENST00000452162 ZNF230Q9UIE0 474 aaPredicted RBP9.22□□□□□ -0.93
PKP4-206ENST00000452162 FREM1Q5H8C1 2179 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 HECTD1Q9ULT8 2610 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 MSTNO14793 375 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 ARPC5O15511 151 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 SS18L1O75177 396 aaPredicted RBP9.21□□□□□ -0.93
PKP4-206ENST00000452162 PLATP00750 562 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 IFNA7P01567 189 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 HOXD4P09016 255 aaPredicted RBP9.21□□□□□ -0.93
PKP4-206ENST00000452162 PPP3CBP16298 524 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 AGTR1P30556 359 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 PTGER4P35408 488 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 ATP1B3P54709 279 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 TAS2R31P59538 309 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 CDSNQ15517 529 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 PLCXD3Q63HM9 321 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 MOB3CQ70IA8 216 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 PEG10Q86TG7 708 aaKnown RBP9.21□□□□□ -0.93
PKP4-206ENST00000452162 CSNK2A3Q8NEV1 391 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 PXT1Q8NFP0 134 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 ITLN2Q8WWU7 325 aaPredicted RBP9.21□□□□□ -0.93
PKP4-206ENST00000452162 MAFIPQ8WZ33 124 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 EMG1Q92979 244 aaKnown RBP9.21□□□□□ -0.93
PKP4-206ENST00000452162 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.93
PKP4-206ENST00000452162 PRSS50Q9UI38 385 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 HSF4Q9ULV5 492 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 GPR132Q9UNW8 380 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 SLC7A11Q9UPY5 501 aa9.21□□□□□ -0.93
PKP4-206ENST00000452162 FXYD6-FXYD2A0A087WZ82 144 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 RPS10-NUDT3A0A1W2PQS6 291 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 RFPL4AA6NLU0 287 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 RFPL4AL1F8VTS6 287 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 CSTBP04080 98 aaKnown RBP9.21□□□□□ -0.94
PKP4-206ENST00000452162 SERPINA5P05154 406 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 FPR2P25090 351 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 ARR3P36575 388 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 IL13RA1P78552 427 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 SORDQ00796 357 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 PDZK1IP1Q13113 114 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 AADACL3Q5VUY0 350 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 NSUN5P2Q63ZY6 315 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 TMEM211Q6ICI0 200 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 MRGPRGQ86SM5 289 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 NAXEQ8NCW5 288 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 TMEM185AQ8NFB2 350 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 OR5AP2Q8NGF4 316 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 PIGCQ92535 297 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms