RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 HTR1FP30939 366 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 RBP2P50120 134 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 DYNLT3P51808 116 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 EFNB2P52799 333 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 ATP1B3P54709 279 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 CDC42P60953 191 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 ERVK11-1P61568 191 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 IL18R1Q13478 541 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 CNN3Q15417 329 aaKnown RBP5.75□□□□□ -1.49
VPS41-208ENST00000448833 ATP6AP1Q15904 470 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 SPIN3Q5JUX0 258 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 MINOS1Q5TGZ0 78 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 TMEM244Q5VVB8 128 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 C12orf73Q69YU5 71 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 KDM4DQ6B0I6 523 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OR52W1Q6IF63 320 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 FAM220AQ7Z4H9 259 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 EGFL6Q8IUX8 553 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 C10orf67Q8IYJ2 551 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OR8H2Q8N162 312 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 PNKDQ8N490 385 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 ASCC1Q8N9N2 400 aaKnown RBP5.75□□□□□ -1.49
VPS41-208ENST00000448833 DNAAF1Q8NEP3 725 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OR11H6Q8NGC7 330 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OR8J1Q8NGP2 316 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OR14K1Q8NGZ2 314 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 FAM110DQ8TAY7 271 aaPredicted RBP5.75□□□□□ -1.49
VPS41-208ENST00000448833 CFHR4Q92496 578 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 CREB3L1Q96BA8 519 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 BORCS8Q96FH0 119 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 AKR1E2Q96JD6 320 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 SNX22Q96L94 193 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 CEP19Q96LK0 163 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 IL4I1Q96RQ9 567 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 PRSS22Q9GZN4 317 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 FGF23Q9GZV9 251 aaPredicted RBP5.75□□□□□ -1.49
VPS41-208ENST00000448833 GPR173Q9NS66 373 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OR14J1Q9UGF5 321 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 AP4S1Q9Y587 144 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 ORC6Q9Y5N6 252 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 MINOS1-NBL1R4GNA1 71 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 A0A1B0GTI1 187 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 SH2D1BO14796 132 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 SYNGR1O43759 233 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 RPP14O95059 124 aaKnown RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 ARG1P05089 322 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 BRS3P32247 399 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 EDDM3BP56851 147 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 KRTAP10-3P60369 221 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 ACTC1P68032 377 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 ACTA1P68133 377 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 COL10A1Q03692 680 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 MFGE8Q08431 387 aaPredicted RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 DYNC1I2Q13409 638 aaKnown RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 LY6EQ16553 131 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 ARSJQ5FYB0 599 aaPredicted RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 MEDAGQ5VYS4 303 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 HCP5Q6MZN7 132 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 CRIP3Q6Q6R5 217 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 C16orf82Q7Z2V1 217 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 RTN4RL2Q86UN3 420 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 CATSPERDQ86XM0 798 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 ANGPTL5Q86XS5 388 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 C11orf42Q8N5U0 333 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 OR4F17Q8NGA8 305 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 OR4M1Q8NGD0 313 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 CAPSLQ8WWF8 208 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 SLC7A6OSQ96CW6 309 aaPredicted RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 ZNF714Q96N38 554 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 OR4F4Q96R69 305 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 CHST5Q9GZS9 411 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 GABARAPL1Q9H0R8 117 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 GAL3ST2Q9H3Q3 398 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 ELL3Q9HB65 397 aaPredicted RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 MRM2Q9UI43 246 aaKnown RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 COPS3Q9UNS2 423 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 UBE2J1Q9Y385 318 aaPredicted RBP5.74□□□□□ -1.49
VPS41-208ENST00000448833 LINC00312Q9Y6C7 94 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 NOTCH1P46531 2555 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 KIAA2026Q5HYC2 2103 aa5.74□□□□□ -1.49
VPS41-208ENST00000448833 A0A1W2PQL4 384 aaPredicted RBP5.73□□□□□ -1.49
VPS41-208ENST00000448833 MEGF11A6BM72 1044 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 F2RL2O00254 374 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 MGST3O14880 152 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 FBXO24O75426 580 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 TSPAN15O95858 294 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 TFF1P04155 84 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 ISG15P05161 165 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 IGHV1-8P0DP01 117 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 VSIG10L2P0DP72 767 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 CCL3L1P16619 93 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 ZNF20P17024 532 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 COX7A1P24310 79 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 HTR1DP28221 377 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 ERP29P30040 261 aaKnown RBP5.73□□□□□ -1.49
VPS41-208ENST00000448833 CEACAM3P40198 252 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 DLX1P56177 255 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 MTCP1P56278 107 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 BNIP1Q12981 228 aa5.73□□□□□ -1.49
VPS41-208ENST00000448833 ZNF146Q15072 292 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms