RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 PRPF19Q9UMS4 504 aaKnown RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 SLC35A3Q9Y2D2 325 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 SAMHD1Q9Y3Z3 626 aaKnown RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TRAV38-1A0A0B4J264 116 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 A0A1W2PQ09 198 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 A0A1W2PRG6 482 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 OOEPA6NGQ2 149 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MSGN1A6NI15 193 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SERPINE3A8MV23 424 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 FAM90A22PA8MWA6 464 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 FAAHO00519 579 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 TSPAN4O14817 238 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ANGPT2O15123 496 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MLNRO43193 412 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 GPX5O75715 221 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 PIAS1O75925 651 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 GLCEO94923 617 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 RAB3DO95716 219 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 HPRP00739 348 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 FGF4P08620 206 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 GNAO1P09471 354 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ANXA4P09525 319 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 OR8U8P0C7N1 319 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 PGA5P0DJD9 388 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 HSD3B1P14060 373 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 NUP62P37198 522 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 CCT3P49368 545 aaKnown RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MEOX2P50222 304 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SERPINB9P50453 376 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ALDH3A2P51648 485 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 RAD23AP54725 363 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 TCTAP57738 103 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 GNB1P62873 340 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 FLI1Q01543 452 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF616Q08AN1 781 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ECH1Q13011 328 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 FADDQ13158 208 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 OXA1LQ15070 435 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 LRRC36Q1X8D7 754 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SPIN4Q56A73 249 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 YIF1BQ5BJH7 314 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SEL1L2Q5TEA6 688 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 AGBL2Q5U5Z8 902 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ACSM2BQ68CK6 577 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 OR2T2Q6IF00 324 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 HDDC2Q7Z4H3 204 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 KLHL7Q8IXQ5 586 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MREGQ8N565 214 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 FNDC5Q8NAU1 212 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SPATA4Q8NEY3 305 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 OR5D16Q8NGK9 328 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 UBALD1Q8TB05 177 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 DTD1Q8TEA8 209 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 C4orf3Q8WVX3 66 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 CNOT9Q92600 299 aaKnown RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 HAVCR1Q96D42 359 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SEH1LQ96EE3 360 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 GPR22Q99680 433 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 TXN2Q99757 166 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ECSITQ9BQ95 431 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 COPS4Q9BT78 406 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 TMEM120AQ9BXJ8 343 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MROQ9BYG7 248 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MRPS26Q9BYN8 205 aaKnown RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF350Q9GZX5 532 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SRD5A3Q9H8P0 318 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MEAF6Q9HAF1 191 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 GNB4Q9HAV0 340 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 TMBIM4Q9HC24 238 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 B3GAT2Q9NPZ5 323 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 IFT46Q9NQC8 304 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 ZCCHC3Q9NUD5 404 aaKnown RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 COA4Q9NYJ1 87 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 RSL24D1Q9UHA3 163 aaKnown RBP3.65□□□□□ -1.83
SDCBP-205ENST00000447267 PCTPQ9UKL6 214 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 MKLN1Q9UL63 735 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 SNX24Q9Y343 169 aa3.65□□□□□ -1.83
SDCBP-205ENST00000447267 LOC100506127A0A0U1RQW1 187 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 LOC102725191A0A1B0GVB3 256 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SERTM2A0A1B0GWG4 89 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 A8MVM7 634 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 FAM25AB3EWG3 89 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 FAM25CB3EWG5 89 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 FAM25GB3EWG6 89 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SLC22A2O15244 555 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SEC22BO75396 215 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SCO1O75880 301 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 KRT36O76013 467 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 CCNB2O95067 398 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 IGLV1-51P01701 117 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 MBP02144 154 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ARG1P05089 322 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 FCER2P06734 321 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ANXA2P07355 339 aaKnown RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 RAB3AP20336 220 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 EFNA1P20827 205 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 GALP22466 123 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 AZGP1P25311 298 aaKnown RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 DUSP1P28562 367 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms