RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ADAD2Q8NCV1 583 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPEPL1Q8NDH3 523 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR52L2PQ8NGH6 319 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR51G1Q8NGK1 321 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR5D14Q8NGL3 314 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR4S2Q8NH73 311 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 SCGB1C1Q8TD33 95 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 C11orf40Q8WZ69 217 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR1E3Q8WZA6 343 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 BCL2L2Q92843 193 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 APH1AQ96BI3 265 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 STARD4Q96DR4 205 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 SDSLQ96GA7 329 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 THOC3Q96J01 351 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRGPRX1Q96LB2 322 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 AP1S3Q96PC3 154 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 SMIM7Q9BQ49 75 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 C16orf70Q9BSU1 422 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PSMG3Q9BT73 122 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TPSD1Q9BZJ3 242 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 C5orf66Q9H5L9 145 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 IGFLR1Q9H665 355 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 EHFQ9NZC4 300 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRM2Q9UI43 246 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 LSM7Q9UK45 103 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PSG11Q9UQ72 335 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TIMM13Q9Y5L4 95 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TRAPPC1Q9Y5R8 145 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PTPRDP23468 1912 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 RLFQ13129 1914 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 THSD7AQ9UPZ6 1657 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A087WV62 115 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A1W2PRS3 328 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CRYM-AS1A6NIL9 109 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 KCNQ2O43526 872 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 FGF17O60258 216 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR7C2O60412 319 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 MTX2O75431 263 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 TBX6O95947 436 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 MT-CO2P00403 227 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 IGHEP01854 428 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 GYPBP06028 91 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 F3P13726 295 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 HIST1H1DP16402 221 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 PSMB5P28074 263 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CORO1AP31146 461 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 THPOP40225 353 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 GUCA1AP43080 201 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC6A8P48029 635 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 TM4SF4P48230 202 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF136P52737 540 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 EMP2P54851 167 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 FGF8P55075 233 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ELLP55199 621 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 SELENOVP59797 346 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CSNK2A1P68400 391 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 HBG1P69891 147 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 HBG2P69892 147 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 EWSR1Q01844 656 aaKnown RBP eCLIP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 MESP2Q0VG99 397 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 FOXL1Q12952 345 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 TAF10Q12962 218 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF154Q13106 437 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ARFRP1Q13795 201 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRPL58Q14197 206 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CNN3Q15417 329 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 MSMO1Q15800 293 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 RSPO4Q2I0M5 234 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 HLA-BQ31612 363 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 SNAI3Q3KNW1 292 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 SPATA45Q537H7 98 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 EXOSC6Q5RKV6 272 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 LDLRAD2Q5SZI1 272 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 DCST2Q5T1A1 773 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRPL2Q5T653 305 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ATXN7L2Q5T6C5 722 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR4A47Q6IF82 309 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 WDR73Q6P4I2 378 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CNKSR3Q6P9H4 555 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 PLXDC2Q6UX71 529 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 RTN4RL1Q86UN2 441 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 C1orf174Q8IYL3 243 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 FBXL14Q8N1E6 418 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 BATF2Q8N1L9 274 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CFAP52Q8N1V2 620 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR2C3Q8N628 320 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 IL22RA1Q8N6P7 574 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF709Q8N972 641 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CSNK2A3Q8NEV1 391 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR4N2Q8NGD1 307 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR52R1Q8NGF1 315 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR1L6Q8NGR2 347 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR6N2Q8NGY6 317 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 PFN4Q8NHR9 129 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 OTOSQ8NHW6 89 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF596Q8TC21 504 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 LIPHQ8WWY8 451 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 DYRK2Q92630 601 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 DPF1Q92782 380 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 EID2BQ96D98 161 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms