RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SELEP16581 610 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 DTYMKP23919 212 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 FGF12P61328 243 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 C17orf107Q6ZR85 190 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 BATF2Q8N1L9 274 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 RPRMLQ8N4K4 120 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 TMEM246Q9BRR3 403 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 PPA2Q9H2U2 334 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 EHFQ9NZC4 300 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 OR5H1A6NKK0 313 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 PRSS44E7EML9 344 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 FUT3P21217 361 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 DNASE1P24855 282 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 ERVS71-1P61550 626 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 HAGHLQ6PII5 290 aaPredicted RBP16.23■□□□□ 0.19
USP39-202ENST00000409025 C12orf45Q8N5I9 185 aaPredicted RBP16.23■□□□□ 0.19
USP39-202ENST00000409025 OR2T35Q8NGX2 323 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 RTL8AQ9BWD3 113 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 MTCH1Q9NZJ7 389 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 MGAT4AQ9UM21 535 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 INTS1Q8N201 2190 aaKnown RBP16.23■□□□□ 0.19
USP39-202ENST00000409025 OR7C1O76099 320 aaPredicted RBP16.23■□□□□ 0.19
USP39-202ENST00000409025 ZNF35P13682 527 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 PMELP40967 661 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 UBE2MP61081 183 aaKnown RBP16.23■□□□□ 0.19
USP39-202ENST00000409025 RAP2BP61225 183 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 NHLRC3Q5JS37 347 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 FAHD2BQ6P2I3 314 aaPredicted RBP16.23■□□□□ 0.19
USP39-202ENST00000409025 CISD2Q8N5K1 135 aaKnown RBP16.23■□□□□ 0.19
USP39-202ENST00000409025 MARCH1Q8TCQ1 289 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 FAHD2AQ96GK7 314 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 SCGB3A2Q96PL1 93 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 MICU1Q9BPX6 476 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 SFXN3Q9BWM7 321 aa16.23■□□□□ 0.19
USP39-202ENST00000409025 SVILO95425 2214 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 OR2A4O95047 310 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 IGLV1-44P01699 117 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 CECR9P0C854 216 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 CEACAM8P31997 349 aaPredicted RBP16.22■□□□□ 0.19
USP39-202ENST00000409025 ARPC4P59998 168 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 DHRS2Q13268 280 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 PDCD1Q15116 288 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 BRICD5Q6PL45 260 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 C3P1Q6ZMU1 363 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 OVCH2Q7RTZ1 564 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 OR2A7Q96R45 310 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 PKIBQ9C010 78 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 PIPOXQ9P0Z9 390 aa16.22■□□□□ 0.19
USP39-202ENST00000409025 IQCF6A8MYZ5 107 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 SDCBPO00560 298 aaPredicted RBP16.21■□□□□ 0.19
USP39-202ENST00000409025 GOSR2O14653 212 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 RGS13O14921 159 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 SYNGR1O43759 233 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 HLA-AP01891 365 aaKnown RBP16.21■□□□□ 0.19
USP39-202ENST00000409025 FCGR3AP08637 254 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 GSTT2P0CG29 244 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 TUBG1P23258 451 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 TDGF1P3P51864 188 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 TMPRSS3P57727 454 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 TAS2R31P59538 309 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 IL24Q13007 206 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 GRK1Q15835 563 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 LAMTOR1Q6IAA8 161 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 LYG2Q86SG7 212 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 FAM169BQ8N8A8 192 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 Q8NA96 180 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 OR13G1Q8NGZ3 307 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 OR51I2Q9H344 312 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 ZNF442Q9H7R0 627 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 FN3KRPQ9HA64 309 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 TUBG2Q9NRH3 451 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 ANXA10Q9UJ72 324 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 HSPB11Q9Y547 144 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 FRYQ5TBA9 3013 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 IGKV1D-8A0A087WSZ0 117 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 CEACAM18A8MTB9 384 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 TPD52L2O43399 206 aaKnown RBP16.21■□□□□ 0.19
USP39-202ENST00000409025 SLC22A5O76082 557 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 ZBTB25P24278 435 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 NPY4RP50391 375 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 MPPED2Q15777 294 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 C11orf88Q6PI97 169 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 ZNF474Q6S9Z5 364 aaPredicted RBP16.21■□□□□ 0.19
USP39-202ENST00000409025 LHFPL1Q86WI0 220 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 C9orf62Q8N4C0 152 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 ASCC1Q8N9N2 400 aaKnown RBP16.21■□□□□ 0.19
USP39-202ENST00000409025 OR11H4Q8NGC9 324 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 KLF14Q8TD94 323 aaPredicted RBP16.21■□□□□ 0.19
USP39-202ENST00000409025 PLK3Q9H4B4 646 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 SLA2Q9H6Q3 261 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 GPR132Q9UNW8 380 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 SLC25A15Q9Y619 301 aa16.21■□□□□ 0.19
USP39-202ENST00000409025 F8VVB4 439 aa16.2■□□□□ 0.18
USP39-202ENST00000409025 F8VWA3 439 aa16.2■□□□□ 0.18
USP39-202ENST00000409025 PRRG2O14669 202 aa16.2■□□□□ 0.18
USP39-202ENST00000409025 FPR2P25090 351 aa16.2■□□□□ 0.18
USP39-202ENST00000409025 CD34P28906 385 aa16.2■□□□□ 0.18
USP39-202ENST00000409025 PSG7Q13046 419 aa16.2■□□□□ 0.18
USP39-202ENST00000409025 PPP1R1AQ13522 171 aa16.2■□□□□ 0.18
USP39-202ENST00000409025 C2orf68Q2NKX9 166 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms