RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GMEB1Q9Y692 573 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 V9GYQ6 96 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 BPTFQ12830 3046 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 MYO18AQ92614 2054 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 HTTP42858 3142 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 MYO16Q9Y6X6 1858 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF638Q14966 1978 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF816-ZNF321PA0A0X1KG74 233 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 A0A1B0GVI7 797 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 FAM231BA6NCW3 169 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 MGAT4DA6NG13 374 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CCDC160A6NGH7 325 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 F6UB75 175 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 KRTAP4-16G5E9R7 235 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF701M0R085 212 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 GNGT2O14610 69 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 SCAMP2O15127 329 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 AKR7A2O43488 359 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 DPM1O60762 260 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ETHE1O95571 254 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 C6orf47O95873 294 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 SERPINA1P01009 418 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 UBCP0CG48 685 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CT45A6P0DMU7 189 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CT45A5P0DMU8 189 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CT45A7P0DMV0 189 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 C1GALT1C1LP0DN25 315 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 IGHV3-43DP0DP04 118 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 HLA-EP13747 358 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CRISP2P16562 243 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 F2RP25116 425 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 KDELR2P33947 212 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 P2RY2P41231 377 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 MAGEA2P43356 314 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 GPR1P46091 355 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CDK9P50750 372 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ESRRGP62508 458 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 DYNC1I2Q13409 638 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 FZD2Q14332 565 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 HERPUD1Q15011 391 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 PDGFRLQ15198 375 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 SGCAQ16586 387 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 SPIN4Q56A73 249 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CT45A1Q5HYN5 189 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CPTPQ5TA50 214 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR52W1Q6IF63 320 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 FRMPD2BQ6IN97 320 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 LCN12Q6JVE5 192 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF544Q6NX49 715 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ERICH5Q6P6B1 374 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 OAFQ86UD1 273 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 TRAPPC5Q8IUR0 188 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF547Q8IVP9 402 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CLECL1Q8IZS7 167 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 C8orf31Q8N9H6 132 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 CT45A3Q8NHU0 189 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 FGF13Q92913 245 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 RAD51AP1Q96B01 352 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 TMIGD2Q96BF3 282 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 PHYHIPLQ96FC7 376 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 COX14Q96I36 57 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR5B12Q96R08 314 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 EFCAB11Q9BUY7 163 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 EBPLQ9BY08 206 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR2AG1Q9H205 316 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR52A5Q9H2C5 316 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 TPT1P8Q9HAU6 139 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 PRSS16Q9NQE7 514 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZC4H2Q9NQZ6 224 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 DYRK4Q9NR20 520 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 MYEF2Q9P2K5 600 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 RSL24D1Q9UHA3 163 aaKnown RBP3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 SMAD5-AS1Q9Y6J3 95 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
HMGB3P18-201ENST00000406327 DOCK4Q8N1I0 1966 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 SHROOM3Q8TF72 1996 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 TET1Q8NFU7 2136 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 IGKV1D-13A0A0B4J2D9 117 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 A0A0G2JLM5 398 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 KIR2DL5BA0A0G2JN68 375 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 KIR2DL5BA0A0G2JPC4 375 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 LOC100130705A0A1B0GUX0 176 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 GNG14A0A1W2PPG7 69 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 AIREO43918 545 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 UGT2B11O75310 529 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 GCM2O75603 506 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 CPSF4O95639 269 aaKnown RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF682O95780 498 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 AIFM1O95831 613 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 INSP01308 110 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 C1QCP02747 245 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 IGHV4-34P06331 123 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 SERPINE2P07093 398 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 IGKV1-13P0DP09 117 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF250P15622 560 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 FUT3P21217 361 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 PPIBP23284 216 aaKnown RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 CRHBPP24387 322 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ELK4P28324 431 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 BTCP35070 178 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms