RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 GABARAPL1Q9H0R8 117 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 TRAPPC4Q9Y296 219 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 IGHV4-34P06331 123 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 TMPRSS13Q9BYE2 586 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 H7BYZ3 331 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 CDIPTO14735 213 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 MRPS11P82912 194 aaKnown RBP13.17□□□□□ -0.3
LRRK1-201ENST00000388948 WDR38Q5JTN6 314 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 SSX8Q7RTT4 187 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 WFDC3Q8IUB2 231 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 PPP5D1E7EU14 171 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 H3F3CQ6NXT2 135 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 TMUB2Q71RG4 321 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 NUP37Q8NFH4 326 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 CDCA4Q9BXL8 241 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 GNG7O60262 68 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 ARHGAP5-AS1Q96IT6 56 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 COL18A1P39060 1754 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 AQP8O94778 261 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 MPZL1O95297 269 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 STARD6P59095 220 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 FBXW9Q5XUX1 488 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 MSL2Q9HCI7 577 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 DOK5Q9P104 306 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 LIFP15018 202 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 ORM2P19652 201 aa13.17□□□□□ -0.3
LRRK1-201ENST00000388948 PTBP1P26599 531 aaKnown RBP eCLIP13.17□□□□□ -0.3
LRRK1-201ENST00000388948 RCL1Q9Y2P8 373 aaKnown RBP13.17□□□□□ -0.3
LRRK1-201ENST00000388948 CD96P40200 585 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 CD276Q5ZPR3 534 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 INO80CQ6PI98 192 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-201ENST00000388948 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-201ENST00000388948 RABAC1Q9UI14 185 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 SLC17A2O00624 439 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 SLC25A5P05141 298 aaKnown RBP13.16□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF141Q15928 474 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 LILRB1Q8NHL6 650 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-201ENST00000388948 HMGCLL1Q8TB92 370 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 PIMREGQ9BSJ6 248 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 MIA3Q5JRA6 1907 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 CEP250Q9BV73 2442 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 IGHV3OR15-7A0A075B7D8 119 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 CST7O76096 145 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 PNPP00491 289 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 ADRA2AP08913 450 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 SP6Q3SY56 376 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 CELF2-AS1Q8N7Q2 184 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 ZG16BQ96DA0 208 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 PLEKHA2Q9HB19 425 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 PILRBQ9UKJ0 227 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 RAB19A4D1S5 217 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 ARG1P05089 322 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 ENDOGQ14249 297 aaKnown RBP13.16□□□□□ -0.3
LRRK1-201ENST00000388948 DGAT2L7PQ6IED9 249 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 VSTM2AQ8TAG5 236 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 SLC25A40Q8TBP6 338 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 OR4E1P0C645 316 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 OR2F1Q13607 317 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 FAM27D1Q5T7N8 215 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 NRTNQ99748 197 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 ANKRD31Q8N7Z5 1873 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 CCL8P80075 99 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 MOGAT1Q96PD6 335 aa13.16□□□□□ -0.3
LRRK1-201ENST00000388948 SBK3P0C264 359 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 RELAQ04206 551 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 C6orf201Q7Z4U5 140 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 C2orf50Q96LR7 162 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 UCN2Q96RP3 112 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 DIRC2Q96SL1 478 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 ATP5SQ99766 215 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 DDA1Q9BW61 102 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 GON7Q9BXV9 100 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 A0A1B0GUH1 482 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 PAX5Q02548 391 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF658BQ4V348 819 aaPredicted RBP13.15□□□□□ -0.3
LRRK1-201ENST00000388948 DHRS7BQ6IAN0 325 aaPredicted RBP13.15□□□□□ -0.3
LRRK1-201ENST00000388948 ASB10Q8WXI3 467 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 MRPL22Q9NWU5 206 aaKnown RBP13.15□□□□□ -0.3
LRRK1-201ENST00000388948 GPX5O75715 221 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 CTLA4P16410 223 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 UQCC2Q9BRT2 126 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.3
LRRK1-201ENST00000388948 TMEM231Q9H6L2 316 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
LRRK1-201ENST00000388948 J3KRW8 73 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 OR4Q3Q8NH05 313 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 HAND1O96004 215 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 APELAP0DMC3 54 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 OR2B8PP59922 312 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 FAM3AP98173 230 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 GPNMBQ14956 572 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 OR1B1Q8NGR6 318 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 OPN3Q9H1Y3 402 aaPredicted RBP13.15□□□□□ -0.3
LRRK1-201ENST00000388948 C12orf10Q9HB07 376 aa13.15□□□□□ -0.3
LRRK1-201ENST00000388948 KLRB1Q12918 225 aa13.15□□□□□ -0.31
LRRK1-201ENST00000388948 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms