RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RTN4IP1Q8WWV3 396 aaPredicted RBP21.97■■□□□ 1.11
C9orf40-201ENST00000376854 ALKBH3Q96Q83 286 aaPredicted RBP21.97■■□□□ 1.11
C9orf40-201ENST00000376854 PLEKHA2Q9HB19 425 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 LHX6Q9UPM6 363 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 DNPH1O43598 174 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 CD5P06127 495 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 NFYBP25208 207 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 HTR5AP47898 357 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 B3GALT5-AS1P59052 145 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 FXYD4P59646 89 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 TMEM187Q14656 261 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 Q6ZRG5 221 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 OR10AD1Q8NGE0 317 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 MARS2Q96GW9 593 aaKnown RBP21.96■■□□□ 1.11
C9orf40-201ENST00000376854 MBPP02686 304 aaPredicted RBP21.96■■□□□ 1.11
C9orf40-201ENST00000376854 ID4P47928 161 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 CARD18P57730 90 aa21.96■■□□□ 1.11
C9orf40-201ENST00000376854 KLF2Q9Y5W3 355 aaPredicted RBP21.96■■□□□ 1.11
C9orf40-201ENST00000376854 IGKV1-12A0A0C4DH73 117 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 FAM221AA4D161 298 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 OR6C6A6NF89 314 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 TERTO14746 1132 aaKnown RBP21.95■■□□□ 1.1
C9orf40-201ENST00000376854 IGKV1D-12P01611 117 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 CD80P33681 288 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 SLC22A25Q6T423 547 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 OR14L1PQ8NHC6 308 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 CPT1CQ8TCG5 803 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 ERGIC1Q969X5 290 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 CCDC163A0A0D9SF12 145 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 A0A0G2JMM0 328 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 A0A1W2PPB8 328 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 A0A1W2PRS3 328 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 KIR3DP1A8MWS1 328 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 TDGF1P13385 188 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 RFC3P40938 356 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 FAM3AP98173 230 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 FAM76BQ5HYJ3 339 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 TSPO2Q5TGU0 170 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 TMEM42Q69YG0 159 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 WDR5BQ86VZ2 330 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 FBXL14Q8N1E6 418 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 OSR2Q8N2R0 312 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 GALNT14Q96FL9 552 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 BCO1Q9HAY6 547 aa21.95■■□□□ 1.1
C9orf40-201ENST00000376854 E5RGE8 158 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 SRD5A2P31213 254 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 SWI5Q1ZZU3 235 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 PHLDA2Q53GA4 152 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 CLEC9AQ6UXN8 241 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 AAED1Q7RTV5 226 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 UBALD2Q8IYN6 164 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 UBAC2Q8NBM4 344 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 NSG2Q9Y328 171 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 ARID1AO14497 2285 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 HOXA6P31267 233 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 PSG4Q00888 419 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 PDZK1IP1Q13113 114 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 LYZL2Q7Z4W2 148 aa21.94■■□□□ 1.1
C9orf40-201ENST00000376854 ZNF716A6NP11 495 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 C9JQL5 133 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 HEXAP06865 529 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 OR8U9P0C7N5 309 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 KRTAP27-1Q3LI81 207 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 OR8U1Q8NH10 309 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 SUCNR1Q9BXA5 334 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 SLC2A9Q9NRM0 540 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 ST3GAL6Q9Y274 331 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 POMT1Q9Y6A1 747 aa21.93■■□□□ 1.1
C9orf40-201ENST00000376854 NTN3O00634 580 aaPredicted RBP21.92■■□□□ 1.1
C9orf40-201ENST00000376854 FOLR3P41439 243 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 RAB13P51153 203 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 DVL1P1P54792 670 aaPredicted RBP21.92■■□□□ 1.1
C9orf40-201ENST00000376854 GGNQ86UU5 652 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 OR5L1Q8NGL2 311 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 KCNE4Q8WWG9 221 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 KIRREL1Q96J84 757 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 SGCZQ96LD1 299 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 FOXB1Q99853 325 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 TIMM10BQ9Y5J6 103 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 CXCL13O43927 109 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 DIRAS3O95661 229 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 P04436 131 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 GLI4P10075 376 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 BSCL2Q96G97 398 aaPredicted RBP21.92■■□□□ 1.1
C9orf40-201ENST00000376854 PARP12Q9H0J9 701 aaKnown RBP21.92■■□□□ 1.1
C9orf40-201ENST00000376854 ZNF391Q9UJN7 358 aa21.92■■□□□ 1.1
C9orf40-201ENST00000376854 RGS19P49795 217 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 ZNF92Q03936 586 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 LIAT1Q6ZQX7 453 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 LRTM2Q8N967 370 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 FGFBP3Q8TAT2 258 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 OR2H1Q9GZK4 316 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 WNT5BQ9H1J7 359 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 ZNF286AQ9HBT8 521 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 FAM212BQ9NTI7 297 aaPredicted RBP21.91■■□□□ 1.1
C9orf40-201ENST00000376854 SLC7A11Q9UPY5 501 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 COLQQ9Y215 455 aaPredicted RBP21.91■■□□□ 1.1
C9orf40-201ENST00000376854 hCG_38984A0A1B0GV85 526 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 FAM157AC9JC47 383 aa21.91■■□□□ 1.1
C9orf40-201ENST00000376854 FUT6P51993 359 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms