RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SLC25A42Q86VD7 318 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 PRIMA1Q86XR5 153 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 UEVLDQ8IX04 471 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 MUC20Q8N307 709 aaPredicted RBP8.96□□□□□ -0.98
COL5A1-202ENST00000371820 GPR137CQ8N3F9 429 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 KCNRGQ8N5I3 272 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 ZIC4Q8N9L1 334 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 OR5T2Q8NGG2 359 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 OR2AJ1Q8NGZ0 328 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 THAP6Q8TBB0 222 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 RNF133Q8WVZ7 376 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 ASB10Q8WXI3 467 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 BARX1Q9HBU1 254 aaPredicted RBP8.96□□□□□ -0.98
COL5A1-202ENST00000371820 MRPL22Q9NWU5 206 aaKnown RBP8.96□□□□□ -0.98
COL5A1-202ENST00000371820 SDHAF2Q9NX18 166 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 SHPKQ9UHJ6 478 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 COA3Q9Y2R0 106 aaPredicted RBP8.96□□□□□ -0.98
COL5A1-202ENST00000371820 HIVEP2P31629 2446 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 ROS1P08922 2347 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 CSPG4Q6UVK1 2322 aa8.96□□□□□ -0.98
COL5A1-202ENST00000371820 FXYD6-FXYD2A0A087WZ82 144 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 MFSD2BA6NFX1 497 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 A8MXK9 166 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 SHISA9B4DS77 424 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 MS4A18H0YCH9 400 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
COL5A1-202ENST00000371820 ARPC5O15511 151 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 SRSF10O75494 262 aaKnown RBP8.95□□□□□ -0.98
COL5A1-202ENST00000371820 FCER2P06734 321 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 DANCRP0C864 163 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 VSIG10L2P0DP72 767 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 LAP3P28838 519 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 CD34P28906 385 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 GNALP38405 381 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 KCNMB1Q16558 191 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 MS4A18Q3C1V0 323 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 TMEM255AQ5JRV8 349 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 LYG2Q86SG7 212 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 DTX2Q86UW9 622 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 FBXL14Q8N1E6 418 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 JAGN1Q8N5M9 183 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 INO80EQ8NBZ0 244 aaPredicted RBP8.95□□□□□ -0.98
COL5A1-202ENST00000371820 SLC26A10Q8NG04 563 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 OR1K1Q8NGR3 316 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 LILRB1Q8NHL6 650 aaPredicted RBP8.95□□□□□ -0.98
COL5A1-202ENST00000371820 KCNG3Q8TAE7 436 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 AQP3Q92482 292 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 C10orf35Q96D05 121 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 ALKBH3Q96Q83 286 aaPredicted RBP8.95□□□□□ -0.98
COL5A1-202ENST00000371820 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 URM1Q9BTM9 101 aaKnown RBP8.95□□□□□ -0.98
COL5A1-202ENST00000371820 FXYD6Q9H0Q3 95 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 IFT46Q9NQC8 304 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 G6PC2Q9NQR9 355 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 ZC4H2Q9NQZ6 224 aa8.95□□□□□ -0.98
COL5A1-202ENST00000371820 A0A1W2PR80 420 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 OR5H14A6NHG9 310 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 RPL36A-HNRNPH2H7BZ11 118 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 H7C1C5 153 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 OVOL3O00110 214 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 SYT7O43581 403 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 CA11O75493 328 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 SOD3P08294 240 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 FGF2P09038 288 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 ACSM4P0C7M7 580 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF35P13682 527 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 CTLA4P16410 223 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 MAGEB1P43366 347 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 CX3CR1P49238 355 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 FOXG1P55316 489 aaPredicted RBP8.94□□□□□ -0.98
COL5A1-202ENST00000371820 LCN6P62502 163 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 GRB2P62993 217 aaKnown RBP8.94□□□□□ -0.98
COL5A1-202ENST00000371820 TAF13Q15543 124 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 C3orf36Q3SXR2 165 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF260Q3ZCT1 412 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 EIF5AL1Q6IS14 154 aaKnown RBP8.94□□□□□ -0.98
COL5A1-202ENST00000371820 C11orf87Q6NUJ2 197 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 DCXRQ7Z4W1 244 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 KDM8Q8N371 416 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 ARRDC1Q8N5I2 433 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 WDR31Q8NA23 367 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 PXT1Q8NFP0 134 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 OR5M8Q8NGP6 311 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 LHFPL5Q8TAF8 219 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 NEUROG1Q92886 237 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 CPNE2Q96FN4 548 aaPredicted RBP8.94□□□□□ -0.98
COL5A1-202ENST00000371820 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 PDCD10Q9BUL8 212 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 POFUT1Q9H488 388 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 CBLN4Q9NTU7 201 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 TAS2R4Q9NYW5 299 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 B3GAT1Q9P2W7 334 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 GDF2Q9UK05 429 aaPredicted RBP8.94□□□□□ -0.98
COL5A1-202ENST00000371820 SLC22A13Q9Y226 551 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 FBN3Q75N90 2809 aa8.94□□□□□ -0.98
COL5A1-202ENST00000371820 FREM1Q5H8C1 2179 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 A0A1B0GTI1 187 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 LOC107986453A0A1B0GWG9 222 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 RAB19A4D1S5 217 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms