RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CACNG5Q9UF02 275 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 NAT8Q9UHE5 227 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 RCC1P18754 421 aaPredicted RBP14.12□□□□□ -0.15
COL17A1-202ENST00000369733 RRADP55042 308 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 PRR27Q6MZM9 219 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 PGLYRP3Q96LB9 341 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 PTPRFP10586 1907 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 HPP00738 406 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 MBPP02686 304 aaPredicted RBP14.12□□□□□ -0.15
COL17A1-202ENST00000369733 FAM157BP0CG42 384 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 NAAAQ02083 359 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 PRSS53Q2L4Q9 553 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 FAM78BQ5VT40 261 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 SLC25A22Q9H936 323 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 KLHDC2Q9Y2U9 406 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 B4DEV8 164 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 OR5G3P0C626 314 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 ZBTB25P24278 435 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 LYRM2Q9NU23 88 aaPredicted RBP14.12□□□□□ -0.15
COL17A1-202ENST00000369733 DRD3P35462 400 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 PKIAP61925 76 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 FAM209BQ5JX69 171 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 LIAT1Q6ZQX7 453 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 FGF14Q92915 247 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 S1PR3Q99500 378 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 SIRT7Q9NRC8 400 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 OR5H15A6NDH6 313 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 GATCO43716 136 aaKnown RBP14.11□□□□□ -0.15
COL17A1-202ENST00000369733 MMP7P09237 267 aaPredicted RBP14.11□□□□□ -0.15
COL17A1-202ENST00000369733 VSIG8P0DPA2 414 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 LBX1P52954 281 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 DSCR4P56555 118 aaPredicted RBP14.11□□□□□ -0.15
COL17A1-202ENST00000369733 RPS4XP62701 263 aaKnown RBP14.11□□□□□ -0.15
COL17A1-202ENST00000369733 BSXQ3C1V8 233 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 Q5BKY6 102 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 KMT5CQ86Y97 462 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 ATP5SQ99766 215 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 CES1P1Q9UKY3 287 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 CBR3O75828 277 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 TMEM240Q5SV17 173 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 NAT8BQ9UHF3 227 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 PNPP00491 289 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 COTL1Q14019 142 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 UBALD1Q8TB05 177 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 APOBEC3DQ96AK3 386 aaPredicted RBP14.11□□□□□ -0.15
COL17A1-202ENST00000369733 LOC105371267A0A1B0GV96 52 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 DUXBA0A1W2PPF3 345 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 PPP1CAP62136 330 aa14.11□□□□□ -0.15
COL17A1-202ENST00000369733 CCKARP32238 428 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 SCCPDHQ8NBX0 429 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 ZNF707Q96C28 371 aaPredicted RBP14.1□□□□□ -0.15
COL17A1-202ENST00000369733 YIF1AO95070 293 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 SEC11BP0C7V7 166 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 GLB1P16278 677 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 NSUN5P2Q63ZY6 315 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 ZNF774Q6NX45 483 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OR10A7Q8NGE5 316 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OR2T10Q8NGZ9 312 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OIT3Q8WWZ8 545 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 CHRDL1Q9BU40 450 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 ZNF391Q9UJN7 358 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 ZNF891A8MT65 544 aaPredicted RBP14.1□□□□□ -0.15
COL17A1-202ENST00000369733 METTL12A8MUP2 240 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 KIAA1324LA8MWY0 1029 aaPredicted RBP14.1□□□□□ -0.15
COL17A1-202ENST00000369733 TBC1D26Q86UD7 250 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OR10G3Q8NGC4 313 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OR10G4Q8NGN3 311 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OR10G9Q8NGN4 311 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OR10G7Q8NGN6 311 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 OR2V1Q8NHB1 315 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 SLC25A38Q96DW6 304 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 MRPS18BQ9Y676 258 aaKnown RBP14.1□□□□□ -0.15
COL17A1-202ENST00000369733 TOX4O94842 621 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 IL3RAP26951 378 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 KIR3DL2P43630 455 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 RAC1P63000 192 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 EWSR1Q01844 656 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL17A1-202ENST00000369733 SRSF5Q13243 272 aaKnown RBP14.1□□□□□ -0.15
COL17A1-202ENST00000369733 ZNF596Q8TC21 504 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 PPP1R14DQ9NXH3 145 aa14.1□□□□□ -0.15
COL17A1-202ENST00000369733 HRKO00198 91 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 FCN1O00602 326 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 DEFA4P12838 97 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 RTL8BQ17RB0 113 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 Q3ZCU0 254 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 TMEM178AQ8NBL3 297 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 FER1L6-AS2Q96M78 137 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 FAM60AQ9NP50 221 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 MTCH2Q9Y6C9 303 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 GEMIN2O14893 280 aaKnown RBP14.09□□□□□ -0.15
COL17A1-202ENST00000369733 SOX15O60248 233 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 NDUFB7P17568 137 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 LPAR6P43657 344 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 ZNF154Q13106 437 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 DGAT2L6Q6ZPD8 337 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 MYPOPQ86VE0 399 aaPredicted RBP14.09□□□□□ -0.15
COL17A1-202ENST00000369733 WDR13Q9H1Z4 485 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 IGHV5-51A0A0C4DH38 117 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 CYR61O00622 381 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 CEACAM6P40199 344 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms