RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 E7EQL1 145 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 LY6HO94772 140 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 PSMG1O95456 288 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 OXSR1O95747 527 aaPredicted RBP3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 PDYNP01213 254 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 C2P06681 752 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 CSNK2A2P19784 350 aaPredicted RBP3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 ATP6V1B2P21281 511 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 EVI2BP34910 448 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 DDOSTP39656 456 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 BSPH1Q075Z2 132 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 LOXL1Q08397 574 aaPredicted RBP3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 STX5Q13190 355 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 OXA1LQ15070 435 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 RAET1LQ5VY80 246 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 SCIMPQ6UWF3 145 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 UTS2BQ765I0 119 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 GDPD3Q7L5L3 318 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 TMEM179BQ7Z7N9 219 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 VRK2Q86Y07 508 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 TGIF2LXQ8IUE1 241 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 LRRC8AQ8IWT6 810 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 SLC35F6Q8N357 371 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 FTMTQ8N4E7 242 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 BBS1Q8NFJ9 593 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR4K17Q8NGC6 315 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR52I1Q8NGK6 324 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR6K3Q8NGY3 331 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR10D3Q8NH80 312 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 AKR7LQ8NHP1 331 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZNF675Q8TD23 568 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 UFD1Q92890 307 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 TPD52L3Q96J77 140 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 SERPINI1Q99574 410 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 CENPKQ9BS16 269 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 PLA2G12AQ9BZM1 189 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 NMRAL1Q9HBL8 299 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 THUMPD1Q9NXG2 353 aaKnown RBP3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 TMCO1Q9UM00 188 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 SNX12Q9UMY4 172 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 CFL2Q9Y281 166 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 SNX24Q9Y343 169 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 UGT2A1Q9Y4X1 527 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 NPTNQ9Y639 398 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 EML6Q6ZMW3 1958 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 GOLGA8QA0A0J9YX86 632 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 GOLGA8OA6NCC3 632 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 GOLGA8NF8WBI6 632 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 GOLGA8RI6L899 631 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 HSD17B6O14756 317 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 IGKV3-15P01624 115 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 IL3P08700 152 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 ETS2P15036 469 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZBTB25P24278 435 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 AGTR1P30556 359 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 DEKP35659 375 aaKnown RBP3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 DR1Q01658 176 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 SAMD4BQ5PRF9 694 aaKnown RBP3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 PRAMEF5Q5TYX0 476 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 PRAMEF6Q5VXH4 476 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 C3orf62Q6ZUJ4 267 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 H2BFWTQ7Z2G1 175 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZNF100Q8IYN0 542 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 GTPBP8Q8N3Z3 284 aaPredicted RBP3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 C14orf178Q8N769 122 aaPredicted RBP3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR4F6Q8NGB9 312 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR2V1Q8NHB1 315 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 RHEBL1Q8TAI7 183 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 C10orf105Q8TEF2 133 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 ABHD3Q8WU67 409 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 DNAJA4Q8WW22 397 aaPredicted RBP3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZNF75CPQ92670 426 aaPredicted RBP3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 OXGR1Q96P68 337 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 NICN1Q9BSH3 213 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 CHRDL1Q9BU40 450 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 BEX2Q9BXY8 128 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 TMEM185BQ9H7F4 350 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 DCAF16Q9NXF7 216 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 TREM2Q9NZC2 230 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 PCTPQ9UKL6 214 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 IFT52Q9Y366 437 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 MMP24Q9Y5R2 645 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 CADP27708 2225 aa3.98□□□□□ -1.77
RNU4-39P-201ENST00000362455 PRKDCP78527 4128 aaKnown RBP3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 A0A1W2PP18 115 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 GOLGA6L10A6NI86 522 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 C9JVG2 144 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 UPK1AO00322 258 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 KLHL2O95198 593 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 UTS2O95399 124 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 RPS17P08708 135 aaKnown RBP3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 GFAPP14136 432 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 CRABP2P29373 138 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 IL12BP29460 328 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 CCNG1P51959 295 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 ATP5IP56385 69 aaPredicted RBP3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 CTBP2P56545 445 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms