RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 OR10AD1Q8NGE0 317 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 OR5A2Q8NGI9 324 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 COQ8AQ8NI60 647 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 HIST1H2AAQ96QV6 131 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 HDHD3Q9BSH5 251 aaPredicted RBP14.38□□□□□ -0.11
SAMM50-201ENST00000350028 TNRC6AQ8NDV7 1962 aaKnown RBP14.38□□□□□ -0.11
SAMM50-201ENST00000350028 A0A0D9SG52 128 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 AQP7O14520 342 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 FCGR3AP08637 254 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 FUT3P21217 361 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 CYCSP99999 105 aaKnown RBP14.38□□□□□ -0.11
SAMM50-201ENST00000350028 ELP2Q6IA86 826 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 C11orf87Q6NUJ2 197 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 GSG1LQ6UXU4 331 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 RFPL4BQ6ZWI9 263 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 CCDC36Q8IYA8 594 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 DHRS9Q9BPW9 319 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 C14orf166Q9Y224 244 aaKnown RBP14.38□□□□□ -0.11
SAMM50-201ENST00000350028 AKAP13Q12802 2813 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 RPS10-NUDT3A0A1W2PQS6 291 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 CD300LBA8K4G0 201 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 CEACAM1P13688 526 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 PGAM2P15259 253 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 TGFBR3Q03167 851 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 DEFB109BQ30KR1 87 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 CLEC18BQ6UXF7 455 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 MDP1Q86V88 176 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 MKXQ8IYA7 352 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 NAXEQ8NCW5 288 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 HPSE2Q8WWQ2 592 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF75AQ96N20 296 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 GSX2Q9BZM3 304 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 RAB18Q9NP72 206 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 NECAP2Q9NVZ3 263 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 MPC1Q9Y5U8 109 aa14.37□□□□□ -0.11
SAMM50-201ENST00000350028 FAM25EA8MYX2 175 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 J3QW42 95 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 MSTNO14793 375 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 TPD52L2O43399 206 aaKnown RBP14.36□□□□□ -0.11
SAMM50-201ENST00000350028 CEACAM4O75871 244 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 GLRA1P23415 457 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 WNT5AP41221 380 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 NOVA1P51513 510 aaKnown RBP14.36□□□□□ -0.11
SAMM50-201ENST00000350028 TMEM211Q6ICI0 200 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 SLC30A7Q8NEW0 376 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 OR6K3Q8NGY3 331 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 PPP1R1CQ8WVI7 109 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 CITED4Q96RK1 184 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF2Q9BSG1 426 aaPredicted RBP14.36□□□□□ -0.11
SAMM50-201ENST00000350028 FGF23Q9GZV9 251 aaPredicted RBP14.36□□□□□ -0.11
SAMM50-201ENST00000350028 DECR2Q9NUI1 292 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF581Q9P0T4 197 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 AUP1Q9Y679 476 aa14.36□□□□□ -0.11
SAMM50-201ENST00000350028 C5orf51A6NDU8 294 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 ANKRD30BLA7E2S9 258 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF732B4DXR9 585 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 ZNHIT1O43257 154 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 B3GALNT1O75752 331 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 OR2F2O95006 317 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 CTSDP07339 412 aaPredicted RBP14.35□□□□□ -0.11
SAMM50-201ENST00000350028 OR5H8P0DN80 308 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 SERPINF1P36955 418 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 GPM6AP51674 278 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 SUPT4H1P63272 117 aaKnown RBP14.35□□□□□ -0.11
SAMM50-201ENST00000350028 BAMBIQ13145 260 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 OR2F1Q13607 317 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 SLC9A3R2Q15599 337 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 TBC1D28Q2M2D7 210 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 ESCO2Q56NI9 601 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 NHLRC3Q5JS37 347 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 DHRS11Q6UWP2 260 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 TFAP2EQ6VUC0 442 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 FAM214BQ7L5A3 538 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 THAP6Q8TBB0 222 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 SARAFQ96BY9 339 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 TRIB1Q96RU8 372 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 NMES1Q9C002 83 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF286AQ9HBT8 521 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 DLL3Q9NYJ7 618 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 CRIM1Q9NZV1 1036 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 TNFSF18Q9UNG2 199 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 LEUTXA8MZ59 168 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 EEF1E1-BLOC1S5C9J1V9 151 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 CNOT4O95628 575 aaKnown RBP14.35□□□□□ -0.11
SAMM50-201ENST00000350028 PI3P19957 117 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 HAAOP46952 286 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 NPBWR2P48146 333 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 FGF12P61328 243 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 MRPL49Q13405 166 aaKnown RBP14.35□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF345Q14585 488 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 RTP5Q14D33 572 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 PLEKHN1Q494U1 663 aaPredicted RBP14.35□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF660Q6AZW8 331 aaPredicted RBP14.35□□□□□ -0.11
SAMM50-201ENST00000350028 SLC51BQ86UW2 128 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 KCNRGQ8N5I3 272 aa14.35□□□□□ -0.11
SAMM50-201ENST00000350028 C13orf42A0A1B0GVH6 325 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 OR5B21A6NL26 309 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 HOXB1P14653 301 aaPredicted RBP14.34□□□□□ -0.11
SAMM50-201ENST00000350028 RPS2P15880 293 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms