RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MRC1P22897 1456 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 MS4A18H0YCH9 400 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 POU3F2P20265 443 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 EIF1P41567 113 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 DCAF7P61962 342 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 UBE2L3P68036 154 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 MS4A18Q3C1V0 323 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 LYPD8Q6UX82 237 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TMEM64Q6YI46 380 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 KTI12Q96EK9 354 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 C9orf170A2RU37 121 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 SLCO2B1O94956 709 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 GP1BAP07359 652 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 SGMS2Q8NHU3 365 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 PIK3IP1Q96FE7 263 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 RARRES2Q99969 163 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 CRISPLD2Q9H0B8 497 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ZNF275Q9NSD4 429 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 A0A1B0GWB2 263 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 F5H697 171 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ZNF324O75467 553 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 JAG1P78504 1218 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 DCDP81605 110 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 ZNF816Q0VGE8 651 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 MFAP5Q13361 173 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TBC1D28Q2M2D7 210 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 STAC2Q6ZMT1 411 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 OR1L4Q8NGR5 311 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ZNF107Q9UII5 783 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 EMCNQ9ULC0 261 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 NTNG1Q9Y2I2 539 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TLN2Q9Y4G6 2542 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 MPTX1A8MV57 137 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 CER1O95813 267 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 F13BP05160 661 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 CSN3P07498 182 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 HKR1P10072 659 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 FUT2Q10981 343 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 BTLAQ7Z6A9 289 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ZNF502Q8TBZ5 544 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ZNF480Q8WV37 535 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ZBP1Q9H171 429 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 C1orf167Q5SNV9 1468 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 SPATA31A3Q5VYP0 1347 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 MYADML2A6NDP7 307 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ZNF729A6NN14 1252 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 PITX3O75364 302 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 BCL2P10415 239 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 FOXA1P55317 472 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 TMEM249Q2WGJ8 235 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 DGAT2L7PQ6IED9 249 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 GDF6Q6KF10 455 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 ACSM6Q6P461 480 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 PLXDC1Q8IUK5 500 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 PEX11GQ96HA9 241 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 TMEM101Q96IK0 257 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 FBXL17Q9UF56 701 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 LRRK2Q5S007 2527 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 NCOR2Q9Y618 2525 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 SLC5A10A0PJK1 596 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 KLRG2A4D1S0 409 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 TMEM50AO95807 157 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 HMGN2P05204 90 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 RNF224P0DH78 156 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ABOP16442 354 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 WASP42768 502 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 RPL30P62888 115 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 ATOH1Q92858 354 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 CPPED1Q9BRF8 314 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 KLK11Q9UBX7 282 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 AMY1AP04745 511 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 TMEM33P57088 247 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 YBX1P67809 324 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 SRSF5Q13243 272 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 PSAPL1Q6NUJ1 521 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 GDF7Q7Z4P5 450 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 H1FOOQ8IZA3 346 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 STXBP6Q8NFX7 210 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 NEIL2Q969S2 332 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 SLAMF6Q96DU3 332 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 KLRG1Q96E93 195 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 NGBQ9NPG2 151 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 DMAC2Q9NW81 257 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 VDAC3Q9Y277 283 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 DCBLD2Q96PD2 775 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 SMG9Q9H0W8 520 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 P2RY12Q9H244 342 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 RCC2Q9P258 522 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 MTCH2Q9Y6C9 303 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ADAMTS20P59510 1910 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 CHST1O43916 411 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 LEPROTL1O95214 131 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 FKBP2P26885 142 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 PRDX4Q13162 271 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 PPP1R1AQ13522 171 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 OR10W1Q8NGF6 305 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 KAZALD1Q96I82 304 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 NPY6RQ99463 290 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ULBP2Q9BZM5 246 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms