RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TRAV40A0A0B4J280 105 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 TFF1P04155 84 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 SELLP14151 372 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 AMY2BP19961 511 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 ERVK11-1P61568 191 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 PDZK1IP1Q13113 114 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 DMKNQ6E0U4 476 aaPredicted RBP15.88■□□□□ 0.13
SYNE4-202ENST00000340477 THRSPQ92748 146 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 GHSRQ92847 366 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 RFT1Q96AA3 541 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 GPER1Q99527 375 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 Q9H521 79 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 MTCH1Q9NZJ7 389 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 BLOC1S6Q9UL45 172 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 RAB26Q9ULW5 256 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 KPTNQ9Y664 436 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 ATRQ13535 2644 aa15.88■□□□□ 0.13
SYNE4-202ENST00000340477 RNF212BA8MTL3 300 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 LALBAP00709 142 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 BLMHQ13867 455 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 PDCD1Q15116 288 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 RNLSQ5VYX0 342 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 KIR3DL3Q8N743 410 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 NANOGP1Q8N7R0 232 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 ZFP41Q8N8Y5 198 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 ASCC1Q8N9N2 400 aaKnown RBP15.87■□□□□ 0.13
SYNE4-202ENST00000340477 ZNRF1Q8ND25 227 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 RGP1Q92546 391 aaPredicted RBP15.87■□□□□ 0.13
SYNE4-202ENST00000340477 CNBD2Q96M20 576 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 WDFY2Q96P53 400 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 SLC6A7Q99884 636 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 RHOFQ9HBH0 211 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 TAS2R4Q9NYW5 299 aa15.87■□□□□ 0.13
SYNE4-202ENST00000340477 SIRT4Q9Y6E7 314 aaPredicted RBP15.87■□□□□ 0.13
SYNE4-202ENST00000340477 PNMA8CA0A1B0GUJ8 204 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 A0A1W2PPH5 198 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 SPRY1O43609 319 aaPredicted RBP15.86■□□□□ 0.13
SYNE4-202ENST00000340477 CHRM2P08172 466 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 TMEM225BP0DP42 221 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 PRKACAP17612 351 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 BPIFB3P59826 476 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 ARF6P62330 175 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 BDH1Q02338 343 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 KISS1Q15726 138 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 Q499Y3 187 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 USP43Q70EL4 1123 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 SAXO1Q8IYX7 474 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 FAM58AQ8N1B3 248 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 FGFRL1Q8N441 504 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 CD177Q8N6Q3 437 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 ZNF485Q8NCK3 441 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 OR5D18Q8NGL1 313 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 C8orf46Q8TAG6 207 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 SPACA5Q96QH8 159 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 CDCA4Q9BXL8 241 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 FAM234AQ9H0X4 552 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 MAB21L2Q9Y586 359 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 CUBNO60494 3623 aa15.86■□□□□ 0.13
SYNE4-202ENST00000340477 RGS10O43665 173 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 FCN3O75636 299 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 CELP19835 753 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 BCL3P20749 454 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 MAPK3P27361 379 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-202ENST00000340477 CEBPDP49716 269 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-202ENST00000340477 KLF17Q5JT82 389 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-202ENST00000340477 SPIN3Q5JUX0 258 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 SATL1Q86VE3 508 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 FAM185AQ8N0U4 392 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 ZSCAN4Q8NAM6 433 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-202ENST00000340477 LY6G5BQ8NDX9 201 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 TBC1D15Q8TC07 691 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 C22orf15Q8WYQ4 148 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 CCDC90BQ9GZT6 254 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 FAM192AQ9GZU8 254 aa15.85■□□□□ 0.13
SYNE4-202ENST00000340477 RBFOX1Q9NWB1 397 aaKnown RBP15.85■□□□□ 0.13
SYNE4-202ENST00000340477 RRP15Q9Y3B9 282 aaKnown RBP15.85■□□□□ 0.13
SYNE4-202ENST00000340477 IGHV3OR16-10A0A075B7F0 116 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 ANGPTL7O43827 346 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 RGS9O75916 674 aaPredicted RBP15.84■□□□□ 0.13
SYNE4-202ENST00000340477 CD1AP06126 327 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 SFTPBP07988 381 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 IGHV4-38-2P0DP08 117 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 BMXP51813 675 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 SLC35A2P78381 396 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 COL10A1Q03692 680 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 MED22Q15528 200 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 OR13C5Q8NGS8 318 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 PGLYRP3Q96LB9 341 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 S100A13Q99584 98 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 SIRPDQ9H106 197 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 ELL3Q9HB65 397 aaPredicted RBP15.84■□□□□ 0.13
SYNE4-202ENST00000340477 TMEM138Q9NPI0 162 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 ZNF69Q9UC07 566 aa15.84■□□□□ 0.13
SYNE4-202ENST00000340477 TRBV5-5A0A0J9YX44 114 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 F8VVB4 439 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 F8VWA3 439 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 KDM4BO94953 1096 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 HAND1O96004 215 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 TK1P04183 234 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 MMP9P14780 707 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms