RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 FAM90A8PA6NJQ4 464 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 SNTNA6NMZ2 147 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 SLC16A6O15403 523 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 ENTPD6O75354 484 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 RBP2P50120 134 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 CCR9P51686 369 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 DLX6P56179 175 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 COL10A1Q03692 680 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 TP53I3Q53FA7 332 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 ASPHD2Q6ICH7 369 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 ENTHD1Q8IYW4 607 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 RDH10Q8IZV5 341 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 C17orf50Q8WW18 174 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 RNFT2Q96EX2 444 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 MYCBPQ99417 103 aaPredicted RBP14.43□□□□□ -0.1
HDDC3-201ENST00000330334 FRRS1LQ9P0K9 344 aa14.43□□□□□ -0.1
HDDC3-201ENST00000330334 EXOGQ9Y2C4 368 aaKnown RBP14.43□□□□□ -0.1
HDDC3-201ENST00000330334 DAPL1A0PJW8 107 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 VGLL3A8MV65 326 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 F8VVB4 439 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 F8VWA3 439 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 H3BUX3 64 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 EI24O14681 340 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 CCL3L1P16619 93 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 PRKACBP22694 351 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 ATP1B3P54709 279 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 MEF2CQ06413 473 aaPredicted RBP14.42□□□□□ -0.1
HDDC3-201ENST00000330334 ZNF273Q14593 569 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 KPNB1Q14974 876 aaKnown RBP14.42□□□□□ -0.1
HDDC3-201ENST00000330334 LRRC75BQ2VPJ9 315 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 SLC35E4Q6ICL7 350 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 C11orf88Q6PI97 169 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 CRIP3Q6Q6R5 217 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 LIAT1Q6ZQX7 453 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 SLC25A26Q70HW3 274 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 OR8H2Q8N162 312 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 ACBD7Q8N6N7 88 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 DTX3Q8N9I9 347 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 SNX22Q96L94 193 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 MBOAT4Q96T53 435 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 MMP27Q9H306 513 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 RAB18Q9NP72 206 aa14.42□□□□□ -0.1
HDDC3-201ENST00000330334 IGKV1-9A0A0C4DH69 117 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 RPSAP08865 295 aaKnown RBP14.41□□□□□ -0.1
HDDC3-201ENST00000330334 ZNF728P0DKX0 622 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 KIR2DS4P43632 304 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 LGALS4P56470 323 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 OR12D2P58182 307 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 ZNF146Q15072 292 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 GDPD3Q7L5L3 318 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 BATF2Q8N1L9 274 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 ASCC1Q8N9N2 400 aaKnown RBP14.41□□□□□ -0.1
HDDC3-201ENST00000330334 SLAMF9Q96A28 289 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 SPSB1Q96BD6 273 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 ADAT3Q96EY9 351 aaPredicted RBP14.41□□□□□ -0.1
HDDC3-201ENST00000330334 MRPL48Q96GC5 212 aaKnown RBP14.41□□□□□ -0.1
HDDC3-201ENST00000330334 CDCA4Q9BXL8 241 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 PPA2Q9H2U2 334 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 TCF7L1Q9HCS4 588 aa14.41□□□□□ -0.1
HDDC3-201ENST00000330334 TRBV2A0A0J9YWF9 115 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 H3BSH0 61 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 CYB5AP00167 134 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 MT-ND2P03891 347 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 GABRB1P18505 474 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 ATF1P18846 271 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 MTCP1P56278 107 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 NANOS3P60323 173 aaKnown RBP14.4□□□□□ -0.1
HDDC3-201ENST00000330334 ACTA2P62736 377 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 ACTG2P63267 376 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 CCDC121Q6ZUS5 278 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 LHFPL2Q6ZUX7 228 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 CBR4Q8N4T8 237 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 OR11H6Q8NGC7 330 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 OR13D1Q8NGV5 346 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 PIFOQ8TCI5 191 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 FGGYQ96C11 551 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 MALSU1Q96EH3 234 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 RANBP3Q9H6Z4 567 aaPredicted RBP14.4□□□□□ -0.1
HDDC3-201ENST00000330334 RHOFQ9HBH0 211 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 HHLA2Q9UM44 414 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 TBL2Q9Y4P3 447 aaKnown RBP14.4□□□□□ -0.1
HDDC3-201ENST00000330334 NOTCH1P46531 2555 aa14.4□□□□□ -0.1
HDDC3-201ENST00000330334 hADV38S2A0JD32 116 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 TMEM82A0PJX8 343 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 MPZL2O60487 215 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 HAND1O96004 215 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 HTR1AP08908 422 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 GABRA5P31644 462 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 PDZK1IP1Q13113 114 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 ZIK1Q3SY52 487 aaPredicted RBP14.39□□□□□ -0.11
HDDC3-201ENST00000330334 SPIN3Q5JUX0 258 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 FAM58AQ8N1B3 248 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 RHOXF1Q8NHV9 184 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 PPP1R35Q8TAP8 253 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 EMG1Q92979 244 aaKnown RBP14.39□□□□□ -0.11
HDDC3-201ENST00000330334 PELI1Q96FA3 418 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 Q96MT0 163 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 CMYA5Q8N3K9 4069 aa14.39□□□□□ -0.11
HDDC3-201ENST00000330334 OR4C45A6NMZ5 311 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 ODF3BA8MYP8 253 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms