RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SYT8Q8NBV8 401 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 DDB2Q92466 427 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 NAA50Q9GZZ1 169 aaKnown RBP10.84□□□□□ -0.67
PCF11-201ENST00000298281 FGF22Q9HCT0 170 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 C20orf141Q9NUB4 165 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 WSB2Q9NYS7 404 aaPredicted RBP10.84□□□□□ -0.67
PCF11-201ENST00000298281 FZD2Q14332 565 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 UNQ9370/PRO34162Q6UXP9 181 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 RFLNAQ6ZTI6 216 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 NUFIP2Q7Z417 695 aaKnown RBP10.84□□□□□ -0.67
PCF11-201ENST00000298281 ZIC5Q96T25 663 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 SLC26A1Q9H2B4 701 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 LIPGQ9Y5X9 500 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 C3orf80F5H4A9 247 aa10.83□□□□□ -0.67
PCF11-201ENST00000298281 HOXA3O43365 443 aaPredicted RBP10.83□□□□□ -0.67
PCF11-201ENST00000298281 GSG1Q2KHT4 349 aa10.83□□□□□ -0.67
PCF11-201ENST00000298281 TMEM108Q6UXF1 575 aa10.83□□□□□ -0.67
PCF11-201ENST00000298281 BCL2L10Q9HD36 194 aa10.83□□□□□ -0.67
PCF11-201ENST00000298281 TAAR3PQ9P1P4 343 aa10.83□□□□□ -0.67
PCF11-201ENST00000298281 NPIPB6E9PJ23 425 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 TCTEX1D1Q8N7M0 179 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 TBC1D29Q9UFV1 150 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 FITM1A5D6W6 292 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 IGHV4-34P06331 123 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 MEIG1Q5JSS6 88 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 FAM109BQ6ICB4 259 aaPredicted RBP10.83□□□□□ -0.68
PCF11-201ENST00000298281 ZNF66Q6ZN08 573 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 ZNF485Q8NCK3 441 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 TMEM37Q8WXS4 190 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 RAB1CQ92928 201 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 NEIL1Q96FI4 390 aaPredicted RBP10.83□□□□□ -0.68
PCF11-201ENST00000298281 ACER3Q9NUN7 267 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 A0A1W2PPC4 97 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 FCGR3BO75015 233 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 OR8B3Q8NGG8 313 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 SMIM19Q96E16 107 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 OR8B2Q96RD0 313 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 SNRPGP15A8MWD9 76 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 SMAD4Q13485 552 aaKnown RBP10.83□□□□□ -0.68
PCF11-201ENST00000298281 ECSCRQ19T08 205 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 RTN4RQ9BZR6 473 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 R4GMQ9 66 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 CRYBG1Q9Y4K1 1723 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 TMEM30CPA0ZSE6 113 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 ARRB2P32121 409 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 GPR3P46089 330 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 RTN4IP1Q8WWV3 396 aaPredicted RBP10.83□□□□□ -0.68
PCF11-201ENST00000298281 GPR84Q9NQS5 396 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 ST3GAL6Q9Y274 331 aa10.83□□□□□ -0.68
PCF11-201ENST00000298281 TRGV5A0A0B4J1U4 118 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 HMGN4O00479 90 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 DXOO77932 396 aaKnown RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 FUNDC1Q8IVP5 155 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 GABRG3Q99928 467 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 CLEC2DQ9UHP7 191 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 ANKRD36CQ5JPF3 1778 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 A0A1W2PR48 441 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 SRFP11831 508 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 SPRED3Q2MJR0 410 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 C20orf27Q9GZN8 174 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 ZC3H12DA2A288 527 aaKnown RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 PRSS37A4D1T9 235 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 ACTL6AO96019 429 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 HIST1H1CP16403 213 aaKnown RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 NMUP48645 174 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 MMP15P51511 669 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 TNFAIP6P98066 277 aaPredicted RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 ABCA7Q8IZY2 2146 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 NKAIN4Q8IVV8 208 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 OR11G2Q8NGC1 345 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 C8orf44Q96CB5 159 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 SMCHD1A6NHR9 2005 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 COX6B1P14854 86 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 ZNF750Q32MQ0 723 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 FAHD2BQ6P2I3 314 aaPredicted RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 THSD4Q6ZMP0 1018 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 Q8IYB0 196 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 LIPAP38571 399 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 RPS19P39019 145 aaKnown RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 ACVR1Q04771 509 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 OR52I2Q8NH67 350 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 SLC35B4Q969S0 331 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 ZNF629Q9UEG4 869 aaPredicted RBP10.82□□□□□ -0.68
PCF11-201ENST00000298281 C4BP0C0L5 1744 aa10.82□□□□□ -0.68
PCF11-201ENST00000298281 CGB1A6NKQ9 187 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 RGS13O14921 159 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 ARG1P05089 322 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 HRH1P35367 487 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 CAPZBP47756 277 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 PNLIPRP3Q17RR3 467 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 LOXL2Q9Y4K0 774 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 RPL12P30050 165 aaKnown RBP10.81□□□□□ -0.68
PCF11-201ENST00000298281 LOXL3P58215 753 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms