RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RHBDL1O75783 438 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 THBDP07204 575 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 NAT1P18440 290 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 AKAP14Q86UN6 197 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 SCCPDHQ8NBX0 429 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 EMG1Q92979 244 aaKnown RBP19.45■□□□□ 0.7
PTX3-201ENST00000295927 PKD1L2Q7Z442 2459 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 NBEAQ8NFP9 2946 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 AMY2AP04746 511 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 ZNF735P0CB33 412 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 ZNF250P15622 560 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 SNU13P55769 128 aaKnown RBP19.45■□□□□ 0.7
PTX3-201ENST00000295927 ZNF154Q13106 437 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 NHLRC3Q5JS37 347 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 LRP11Q86VZ4 500 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 SULT4A1Q9BR01 284 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 IL36RNQ9UBH0 155 aa19.45■□□□□ 0.7
PTX3-201ENST00000295927 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.44■□□□□ 0.7
PTX3-201ENST00000295927 HMX3A6NHT5 357 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 TMEM210A6NLX4 147 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 BOLA2-SMG1P6H3BVE0 249 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 ARPC1BO15143 372 aaKnown RBP19.44■□□□□ 0.7
PTX3-201ENST00000295927 PDCD6O75340 191 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 MEF2DQ14814 521 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 RBMS2Q15434 407 aaKnown RBP19.44■□□□□ 0.7
PTX3-201ENST00000295927 RNASE10Q5GAN6 216 aaKnown RBP19.44■□□□□ 0.7
PTX3-201ENST00000295927 BRICD5Q6PL45 260 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 TMEM108Q6UXF1 575 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 GINS4Q9BRT9 223 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 MSL2Q9HCI7 577 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 NPDC1Q9NQX5 325 aaPredicted RBP19.44■□□□□ 0.7
PTX3-201ENST00000295927 DUSP13Q9UII6 198 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 AK3Q9UIJ7 227 aa19.44■□□□□ 0.7
PTX3-201ENST00000295927 A0A0A6YYJ9 748 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A10PA6NDY2 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A18PA6NE21 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A16PA6NEW6 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A20PA6NIJ5 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A8PA6NJQ4 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A7PA6NKC0 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A22PA8MWA6 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A12PA8MX19 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A5PA8MXJ8 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A23PA8MXZ1 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 OR7C1O76099 320 aaPredicted RBP19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A15PP0C7V4 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A13PP0C7W8 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A14PP0C7W9 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A24PP0C7X0 464 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 HRH1P35367 487 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 ASCL1P50553 236 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 VHLLQ6RSH7 139 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 SSX8Q7RTT4 187 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 BPIFB2Q8N4F0 458 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 OR13G1Q8NGZ3 307 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 OR4K15Q8NH41 348 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 TMEM171Q8WVE6 324 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 SLC6A7Q99884 636 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 HDHD3Q9BSH5 251 aaPredicted RBP19.43■□□□□ 0.7
PTX3-201ENST00000295927 ST6GALNAC5Q9BVH7 336 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 CXXC4Q9H2H0 198 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 ZNF230Q9UIE0 474 aaPredicted RBP19.43■□□□□ 0.7
PTX3-201ENST00000295927 IGHV3-64DA0A0J9YX35 117 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 PEX14O75381 377 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 CSN2P05814 226 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 GRPP07492 148 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 PRKACAP17612 351 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 FUT3P21217 361 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 NKPD1Q17RQ9 610 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 HOGA1Q86XE5 327 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 PLEKHA6Q9Y2H5 1048 aa19.43■□□□□ 0.7
PTX3-201ENST00000295927 TPRP12270 2363 aaKnown RBP19.42■□□□□ 0.7
PTX3-201ENST00000295927 A0A1B0GWJ7 208 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 C7orf66A4D0T2 115 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 F5H5P2 479 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 IGHV3-13P01766 116 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 TBPP20226 339 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 PTAFRP25105 342 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 CHRNB4P30926 498 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 GIMAP1Q8WWP7 306 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 BEX2Q9BXY8 128 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 BEX1Q9HBH7 125 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 POLDIP2Q9Y2S7 368 aa19.42■□□□□ 0.7
PTX3-201ENST00000295927 DISC1C4P0D8 188 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 PRSS44E7EML9 344 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 C3orf80F5H4A9 247 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 CDIPTO14735 213 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 PMP2P02689 132 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 RPS23P62266 143 aaKnown RBP19.41■□□□□ 0.7
PTX3-201ENST00000295927 MICBQ29980 383 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 ATAD3CQ5T2N8 411 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 FAM58AQ8N1B3 248 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
PTX3-201ENST00000295927 SPERTQ8NA61 448 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 MAFIPQ8WZ33 124 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 WFIKKN1Q96NZ8 548 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 GHITMQ9H3K2 345 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 PLK3Q9H4B4 646 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 DPRXA6NFQ7 191 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 PYCARD-AS1I3L0S3 204 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms